Using Easel for Modeling and Simulating the Interactions of Cells in Order to Better Understand the Basics of Biological Processes and to Predict Their Likely Behaviors. - Vojislav Stojkovic; Grace Steele; William Lupton (CSB, 2003)

Agent-Oriented Approach to DNA Computing. - Grace Steele; Vojislav Stojkovic (CSB, 2004)

Two-Phase Quantum Based Evolutionary Algorithm for Multiple Sequence Alignment. - Hongwei Huo; Vojislav Stojkovic (CIS, 2006)

Software Agents Action Securities. - Vojislav Stojkovic; Hongwei Huo (CIS, 2006)

A Maximum Weighted Path Approach to Multiple Alignments for DNA Sequences. - Hongwei Huo; Vojislav Stojkovic; Zhiwei Xiao (ICNC (2), 2006)

A Suffix Tree Construction Algorithm for DNA Sequences. - Hongwei Huo; Vojislav Stojkovic (BIBE, 2007)

A simulated annealing algorithm for multiple sequence alignment with guaranteed accuracy. - Hongwei Huo; Vojislav Stojkovic (ICNC (2), 2007)

An Adaptive Suffix Tree Based Algorithm for Repeats Recognition in a DNA Sequence. - Hongwei Huo; Xiaowu Wang; Vojislav Stojkovic (IJCBS, 2009)

Repeats identification using improved suffix trees. - Hongwei Huo; Xiaowu Wang; Vojislav Stojkovic (Int. J. Comput. Biol. Drug Des., 2009)

A Quantum-Inspired Genetic Algorithm Based on Probabilistic Coding for Multiple Sequence Alignment. - Hongwei Huo; Vojislav Stojkovic; Qiao-Luan Xie (J. Bioinform. Comput. Biol., 2010)

Optimizing genetic algorithm for motif discovery. - Hongwei Huo; Zhenhua Zhao; Vojislav Stojkovic; Lifang Liu 001 (Math. Comput. Model., 2010)

A MapReduce-based Algorithm for Motif Search. - Hongwei Huo; Shuai Lin; Qiang Yu 003; Yipu Zhang; Vojislav Stojkovic (IPDPS Workshops, 2012)