Automatic Quality Assessment of Peptide Tandem Mass Spectra. - Marshall W. Bern; David Goldberg 001; W. Hayes McDonald; John R. Yates III (ISMB/ECCB (Supplement of Bioinformatics), 2004)

SEBINI-CABIN: An Analysis Pipeline for Biological Network Inference, with a Case Study in Protein-Protein Interaction Network Reconstruction. - Ronald C. Taylor; Mudita Singhal; Don Simone Daly; Kelly Domico; Amanda M. White; Deanna L. Auberry; Kenneth J. Auberry; Brian Hooker; Gregory B. Hurst; Jason E. McDermott; W. Hayes McDonald; Dale Pelletier; et al. (ICMLA, 2007)

An analysis pipeline for the inference of protein-protein interaction networks. - Ronald C. Taylor; Mudita Singhal; Don Simone Daly; Jason M. Gilmore; William R. Cannon; Kelly Domico; Amanda M. White; Deanna L. Auberry; Kenneth J. Auberry; Brian Hooker; Gregory B. Hurst; Jason E. McDermott; et al. (Int. J. Data Min. Bioinform., 2009)

A high-throughput de novo sequencing approach for shotgun proteomics using high-resolution tandem mass spectrometry. - Chongle Pan; Byung-Hoon Park; William H. McDonald; Patricia A. Carey; Jillian F. Banfield; Nathan Verberkmoes; Robert L. Hettich; Nagiza F. Samatova (BMC Bioinform., 2010)