Nonparametric methods for the analysis of single-color pathogen microarrays. - Omar J. Jabado; Sean Conlan; Phenix-Lan Quan; Jeffrey Hui; Gustavo F. Palacios; Mady Hornig; Thomas Briese; W. Ian Lipkin (BMC Bioinform., 2010)

Centroid based clustering of high throughput sequencing reads based on n-mer counts. - Alexander Solovyov; W. Ian Lipkin (BMC Bioinform., 2013)

Pathosphere.org: pathogen detection and characterization through a web-based, open source informatics platform. - Andy Kilianski; Patrick Carcel; Shijie Yao; Pierce Roth; Josh Schulte; Greg B. Donarum; Ed T. Fochler; Jessica M. Hill; Alvin T. Liem; Michael R. Wiley; Jason T. Ladner; Bradley P. Pfeffer; et al. (BMC Bioinform., 2015)

DEvis: an R package for aggregation and visualization of differential expression data. - Adam Price; Adrian Caciula; Cheng Guo 010; Bohyun Lee; Juliet Morrison; Angela Rasmussen; W. Ian Lipkin; Komal Jain (BMC Bioinform., 2019)