Detection of virus particles in noisy spot-scan electron cryomicroscopy images. - Pamela A. Thuman-Commike; Wah Chiu (ICIP (3), 1995)

Three-Dimensional Reconstruction of Noisy Electron Microscopy Virus Particle Images. - Pamela A. Thuman-Commike; Wah Chiu (ICIP (1), 1997)

Multiresolution Approach to Automatic Detection of Spherical Particles from Electron Cryomicroscopy Images. - Ali Saad; Wah Chiu; Pamela A. Thuman-Commike (ICIP (3), 1998)

Hierarchical wavelets projection matching for orientation determination of low contrast electron cryomicroscopic images of icosahedral virus particles. - Ali Saad; Wah Chiu (ICASSP, 2000)

Image restoration in sets of noisy electron micrographs. - S. J. Ludike; Wah Chiu (ISBI, 2002)

A geometric database for gene expression data. - Joe D. Warren; Tao Ju 001; Gregor Eichele; Christina Thaller; Wah Chiu; James P. Carson (Symposium on Geometry Processing, 2003)

Detecting Local Symmetry Axis in 3-dimensional Virus Structures. - Jing He 002; Desh Ranjan; Wen Jiang; Wah Chiu; Michael F. Schmid (APBC, 2004)

A transform method for fast generalized image registration. - Yi Wan; Wah Chiu (ICASSP (3), 2004)

Landmark-Driven, Atlas-Based Segmentation of Mouse Brain Tissue Images Containing Gene Expression Data. - Ioannis A. Kakadiaris; Musodiq Bello; Shiva Arunachalam; Wei Kang; Tao Ju 001; Joe D. Warren; James P. Carson; Wah Chiu; Christina Thaller; Gregor Eichele (MICCAI (1), 2004)

Data Mining in situ Gene Expression Patterns at Cellular Resolution. - James P. Carson; Tao Ju 001; Christina Thaller; Musodiq Bello; Joe D. Warren; Gregor Eichele; Wah Chiu (CSB Workshops, 2005)

Data Mining in situ Gene Expression Patterns at Cellular Resolution. - James P. Carson; Christina Thaller; Musodiq Bello; Wah Chiu; Tao Ju 001; Joe D. Warren; Ioannis A. Kakadiaris; Gregor Eichele (CSB Workshops, 2005)

Hybrid Segmentation Framework for Tissue Images Containing Gene Expression Data. - Musodiq Bello; Tao Ju 001; Joe D. Warren; James P. Carson; Wah Chiu; Christina Thaller; Gregor Eichele; Ioannis A. Kakadiaris (MICCAI, 2005)

A Digital Atlas to Characterize the Mouse Brain Transcriptome. - James P. Carson; Tao Ju 001; Hui-Chen Lu; Christina Thaller; Mei Xu; Sarah L. Pallas; Michael C. Crair; Joe D. Warren; Wah Chiu; Gregor Eichele (PLoS Comput. Biol., 2005)

Building 3D surface networks from 2D curve networks with application to anatomical modeling. - Tao Ju 001; Joe D. Warren; James P. Carson; Gregor Eichele; Christina Thaller; Wah Chiu; Musodiq Bello; Ioannis A. Kakadiaris (Vis. Comput., 2005)

Ab Initio Modeling of the Herpesvirus VP26 Core Domain Assessed by CryoEM Density. - Matthew L. Baker; Wen Jiang; William J. Wedemeyer; Frazer J. Rixon; David Baker; Wah Chiu (PLoS Comput. Biol., 2006)

Shape modeling and matching in identifying protein structure from low-resolution images. - Sasakthi S. Abeysinghe; Tao Ju; Wah Chiu; Matthew L. Baker (Symposium on Solid and Physical Modeling, 2007)

Computing a family of skeletons of volumetric models for shape description. - Tao Ju; Matthew L. Baker; Wah Chiu (Comput. Aided Des., 2007)

Learning-Based Segmentation Framework for Tissue Images Containing Gene Expression Data. - Musodiq Bello; Tao Ju 001; James P. Carson; Joe D. Warren; Wah Chiu; Ioannis A. Kakadiaris (IEEE Trans. Medical Imaging, 2007)

Segmentation-free skeletonization of grayscale volumes for shape understanding. - Sasakthi S. Abeysinghe; Matthew L. Baker; Wah Chiu; Tao Ju (Shape Modeling International, 2008)

Shape modeling and matching in identifying 3D protein structures. - Sasakthi S. Abeysinghe; Tao Ju; Matthew L. Baker; Wah Chiu (Comput. Aided Des., 2008)

MOTIF-EM: an automated computational tool for identifying conserved regions in CryoEM structures. - Mitul Saha; Michael Levitt 001; Wah Chiu (Bioinform., 2010)

Semi-isometric Registration of Line Features for Flexible Fitting of Protein Structures. - Sasakthi S. Abeysinghe; Matthew L. Baker; Wah Chiu; Tao Ju (Comput. Graph. Forum, 2010)

Workshop Introduction. - Steven J. Ludtke; Catherine L. Lawson; Gerard J. Kleywegt; Helen M. Berman; Wah Chiu (Pacific Symposium on Biocomputing, 2011)

EMDataBank.org: unified data resource for CryoEM. - Catherine L. Lawson; Matthew L. Baker; Christoph Best; Chunxiao Bi; Matthew T. Dougherty; Powei Feng; Glen van Ginkel; Batsal Devkota; Ingvar C. Lagerstedt; Steven J. Ludtke; Richard H. Newman; Thomas J. Oldfield; et al. (Nucleic Acids Res., 2011)

Iterative reconstruction from limited angle, limited view projections for cryo-electron tomography. - Sally L. Wood; Ernesto Fontenla; Christopher A. Metzler; Wah Chiu; Richard G. Baraniuk (ACSSC, 2015)

Dynamic model generation for application of compressed sensing to cryo-electron tomography reconstruction. - Sally L. Wood; Ernesto Fontenla; Christopher A. Metzler; Wah Chiu; Richard G. Baraniuk (SP/SPE, 2015)

EMDataBank unified data resource for 3DEM. - Catherine L. Lawson; Ardan Patwardhan; Matthew L. Baker; Corey Hryc; Eduardo Sanz-García; Brian P. Hudson; Ingvar C. Lagerstedt; Steven J. Ludtke; Grigore Pintilie; Raul Sala; John D. Westbrook; Helen M. Berman; et al. (Nucleic Acids Res., 2016)

Learning Hyperbolic Representations for Unsupervised 3D Segmentation. - Joy Hsu; Jeffrey Gu; Gong-Her Wu; Wah Chiu; Serena Yeung (CoRR, 2020)

DARCNN: Domain Adaptive Region-Based Convolutional Neural Network for Unsupervised Instance Segmentation in Biomedical Images. - Joy Hsu; Wah Chiu; Serena Yeung (CVPR, 2021)

Capturing implicit hierarchical structure in 3D biomedical images with self-supervised hyperbolic representations. - Joy Hsu; Jeffrey Gu; Gong Her Wu; Wah Chiu; Serena Yeung (NeurIPS, 2021)

RadAdapt: Radiology Report Summarization via Lightweight Domain Adaptation of Large Language Models. - Dave Van Veen; Cara Van Uden; Maayane Attias; Anuj Pareek; Christian Bluethgen; Malgorzata Polacin; Wah Chiu; Jean-Benoit Delbrouck; Juan Manuel Zambrano Chaves; Curtis P. Langlotz; Akshay Chaudhari; John M. Pauly (BioNLP@ACL, 2023)

MicroVQA: A Multimodal Reasoning Benchmark for Microscopy-Based Scientific Research. - James Burgess; Jeffrey J. Nirschl; Laura Bravo-Sánchez; Alejandro Lozano; Sanket Rajan Gupte; Jesus G. Galaz-Montoya; Yuhui Zhang; Yuchang Su; Disha Bhowmik; Zachary Coman; Sarina M. Hasan; Alexandra Johannesson; et al. (CVPR, 2025)