Large-scale co-evolution analysis of protein structural interlogues using the global protein structural interactome map (PSIMAP). - Wan Kyu Kim; Dan M. Bolser; Jong H. Park (Bioinform., 2004)

Equivalent binding sites reveal convergently evolved interaction motifs. - Andreas Henschel; Wan Kyu Kim; Michael Schroeder 001 (Bioinform., 2006)

SCOPPI: a structural classification of protein-protein interfaces. - Christof Winter; Andreas Henschel; Wan Kyu Kim; Michael Schroeder 001 (Nucleic Acids Res., 2006)

The Many Faces of Protein-Protein Interactions: A Compendium of Interface Geometry. - Wan Kyu Kim; Andreas Henschel; Christof Winter; Michael Schroeder 001 (PLoS Comput. Biol., 2006)

Using structural motif descriptors for sequence-based binding site prediction. - Andreas Henschel; Christof Winter; Wan Kyu Kim; Michael Schroeder 001 (BMC Bioinform., 2007)

Age-Dependent Evolution of the Yeast Protein Interaction Network Suggests a Limited Role of Gene Duplication and Divergence. - Wan Kyu Kim; Edward M. Marcotte (PLoS Comput. Biol., 2008)

GARNET - gene set analysis with exploration of annotation relations. - Kyoohyoung Rho; Bumjin Kim; Youngjun Jang; Sanghyun Lee; Taejeong Bae; Jihae Seo; Chae Hwa Seo; Ji-Hyun Lee; Hyunjung Kang; Ungsik Yu; Sunghoon Kim 001; Sanghyuk Lee; et al. (BMC Bioinform., 2011)

miRGator v2.0 : an integrated system for functional investigation of microRNAs. - Sooyoung Cho; Yukyung Jun; Sanghyun Lee; Hyung-Seok Choi; Sungchul Jung; Youngjun Jang; Charny Park; Sangok Kim; Sanghyuk Lee; Wan Kyu Kim (Nucleic Acids Res., 2011)

hiPathDB: a human-integrated pathway database with facile visualization. - Namhee Yu; Jihae Seo; Kyoohyoung Rho; Yeongjun Jang; Jinah Park; Wan Kyu Kim; Sanghyuk Lee (Nucleic Acids Res., 2012)

Identification of upstream regulators for prognostic expression signature genes in colorectal cancer. - Taejeong Bae; Kyoohyoung Rho; Jin Woo Choi; Katsuhisa Horimoto; Wan Kyu Kim; Sunghoon Kim 001 (BMC Syst. Biol., 2013)

miRGator v3.0: a microRNA portal for deep sequencing, expression profiling and mRNA targeting. - Sooyoung Cho; Insu Jang; Yukyung Jun; Suhyeon Yoon; Minjeong Ko; Yeajee Kwon; Ikjung Choi; Hyeshik Chang; Daeun Ryu; Byungwook Lee; V. Narry Kim; Wan Kyu Kim; et al. (Nucleic Acids Res., 2013)

lncRNAtor: a comprehensive resource for functional investigation of long non-coding RNAs. - Charny Park; Namhee Yu; Ikjung Choi; Wan Kyu Kim; Sanghyuk Lee (Bioinform., 2014)

GEPdb: a database for investigating the ternary association of genotype, gene expression and phenotype. - Daeun Ryu; SeongBeom Cho; Hun Kim; Sanghyuk Lee; Wan Kyu Kim (Bioinform., 2014)

gsGator: an integrated web platform for cross-species gene set analysis. - Hyunjung Kang; Ikjung Choi; Sooyoung Cho; Daeun Ryu; Sanghyuk Lee; Wan Kyu Kim (BMC Bioinform., 2014)

miRseqViewer: multi-panel visualization of sequence, structure and expression for analysis of microRNA sequencing data. - Insu Jang; Hyeshik Chang; Yukyung Jun; Seong-Jin Park; Jin Ok Yang; Byungwook Lee; Wan Kyu Kim; V. Narry Kim; Sanghyuk Lee (Bioinform., 2015)

CSgator: an integrated web platform for compound set analysis. - Sera Park; Yeajee Kwon; Hyesoo Jung; Sukyung Jang; Haeseung Lee; Wan Kyu Kim (J. Cheminformatics, 2019)

BEAR: A Novel Virtual Screening Method Based on Large-Scale Bioactivity Data. - Yeajee Kwon; Sera Park; Jaeok Lee; Jiyeon Kang; Hwa Jeong Lee; Wan Kyu Kim (J. Chem. Inf. Model., 2023)