The strength of chemical linkage as a criterion for pruning metabolic graphs. - Wanding Zhou; Luay Nakhleh (Bioinform., 2011)

Properties of Metabolic Graphs: Biological Organization or Representation Artifacts? - Wanding Zhou; Luay Nakhleh (BMC Bioinform., 2011)

Quantifying and Assessing the Effect of Chemical Symmetry in Metabolic Pathways. - Wanding Zhou; Luay Nakhleh (J. Chem. Inf. Model., 2012)

Modeling Integrated Cellular Machinery Using Hybrid Petri-Boolean Networks. - Natalie Berestovsky; Wanding Zhou; Deepak Nagrath; Luay Nakhleh (PLoS Comput. Biol., 2013)

Bias from removing read duplication in ultra-deep sequencing experiments. - Wanding Zhou; Tenghui Chen; Hao Zhao; Agda Karina Eterovic; Funda Meric-Bernstam; Gordon B. Mills; Ken Chen 001 (Bioinform., 2014)

Towards accurate characterization of clonal heterogeneity based on structural variation. - Xian Fan; Wanding Zhou; Zechen Chong; Luay Nakhleh; Ken Chen 001 (BMC Bioinform., 2014)

Computational Methods for Single-cell DNA Methylome Analysis. - Waleed Iqbal; Wanding Zhou (Genom. Proteom. Bioinform., 2023)

Comparative epigenome analysis using Infinium DNA methylation BeadChips. - Wubin Ding; Diljeet Kaur; Steve Horvath; Wanding Zhou (Briefings Bioinform., 2023)

Dupsifter: a lightweight duplicate marking tool for whole genome bisulfite sequencing. - Jacob Morrison; Wanding Zhou; Benjamin K. Johnson; Hui Shen (Bioinform., 2023)