BioMet Toolbox: genome-wide analysis of metabolism. - Marija Cvijovic; Roberto Olivares-Hernández; Rasmus Agren; Niklas Dahr; Wanwipa Vongsangnak; Intawat Nookaew; Kiran Raosaheb Patil; Jens Nielsen (Nucleic Acids Res., 2010)

Bibliome Mining Platform and Application for Building Metabolic Interaction Network. - Preecha Patumcharoenpol; Jonathan Hoyin Chan; Asawin Meechai; Bairong Shen; Wanwipa Vongsangnak (CSBio, 2012)

Biomedical text mining and its applications in cancer research. - Fei Zhu 003; Preecha Patumcharoenpol; Cheng Zhang; Yang Yang; Jonathan H. Chan; Asawin Meechai; Wanwipa Vongsangnak; Bairong Shen (J. Biomed. Informatics, 2013)

The RAVEN Toolbox and Its Use for Generating a Genome-scale Metabolic Model for Penicillium chrysogenum. - Rasmus Agren; Liming Liu; Saeed Shoaie; Wanwipa Vongsangnak; Intawat Nookaew; Jens Nielsen (PLoS Comput. Biol., 2013)

In silico analysis of plant and animal transposable elements. - Moli Huang; Songsak Wattanachaisaereekul; Yu-Jun Han; Wanwipa Vongsangnak (Int. J. Bioinform. Res. Appl., 2014)

In Silico Analysis of Mucor Circinelloides Genome-Scale Model for Enhancing Lipid Production. - Amornpan Klanchui; Wanwipa Vongsangnak; Kobkul Laoteng; Asawin Meechai (CSBio, 2016)

Preface to selected papers from the 6th International Conference on Computational Systems-Biology and Bioinformatics (CSBio2015). - Weerayuth Kittichotirat; Worrawat Engchuan; Wanwipa Vongsangnak; Asawin Meechai (J. Bioinform. Comput. Biol., 2016)

MetGEMs Toolbox: Metagenome-scale models as integrative toolbox for uncovering metabolic functions and routes of human gut microbiome. - Preecha Patumcharoenpol; Massalin Nakphaichit; Gianni Panagiotou; Anchalee Senavonge; Narissara Suratannon; Wanwipa Vongsangnak (PLoS Comput. Biol., 2021)