MASI: microbiota - active substance interactions database. - Xian Zeng; Xue Yang; Jiajun Fan; Ying Tan; Lingyi Ju; Wanxiang Shen; Yali Wang; Xinghao Wang; Weiping Chen; Dianwen Ju; Yuzong Chen 002 (Nucleic Acids Res., 2021)

Out-of-the-box deep learning prediction of pharmaceutical properties by broadly learned knowledge-based molecular representations. - Wan Xiang Shen; Xian Zeng; Feng Zhu 004; Ya li Wang; Chu Qin; Ying Tan; Yu Yang Jiang; Yuzong Chen 002 (Nat. Mach. Intell., 2021)

Toward ordered -omics data science: Researchers on the magic of turning metagenomic chaos into image-like patterns. - Wan Xiang Shen; Yuzong Chen 002 (Patterns, 2023)

Enhanced metagenomic deep learning for disease prediction and consistent signature recognition by restructured microbiome 2D representations. - Wan Xiang Shen; Shu Ran Liang; Yu Yang Jiang; Yuzong Chen 002 (Patterns, 2023)

Deep learning of 2D-Restructured gene expression representations for improved low-sample therapeutic response prediction. - Kai Ping Cheng; Wan Xiang Shen; Yu Yang Jiang; Yan Chen; Yuzong Chen 002; Ying Tan (Comput. Biol. Medicine, 2023)

Efficient generation of protein pockets with PocketGen. - Zaixi Zhang; Wan Xiang Shen; Qi Liu 003; Marinka Zitnik (Nat. Mac. Intell., 2024)