Models of coding sequence evolution. - Wayne Delport; Konrad Scheffler; Cathal Seoighe (Briefings Bioinform., 2009)

Datamonkey 2010: a suite of phylogenetic analysis tools for evolutionary biology. - Wayne Delport; Art F. Y. Poon; Simon D. W. Frost; Sergei L. Kosakovsky Pond (Bioinform., 2010)

CodonTest: Modeling Amino Acid Substitution Preferences in Coding Sequences. - Wayne Delport; Konrad Scheffler; Gordon Botha; Mike B. Gravenor; Spencer V. Muse; Sergei L. Kosakovsky Pond (PLoS Comput. Biol., 2010)

Workshop: Error correction, noise filtering, and phylogenetic analysis of HIV sequences using the 454 platform. - Konrad Scheffler; N. Lance Hepler; Martin D. Smith; Wayne Delport; Art F. Y. Poon; Douglas D. Richman; Sergei L. Kosakovsky Pond (ICCABS, 2012)