Topologically inferring risk-active pathways toward precise cancer classification by directed random walk. - Wei Liu 187; Chunquan Li 002; Yanjun Xu; Haixiu Yang; Qianlan Yao; Junwei Han; Desi Shang; Chunlong Zhang; Fei Su; Xiaoxi Li; Yun Xiao 001; Fan Zhang; et al. (Bioinform., 2013)

The detection of risk pathways, regulated by miRNAs, via the integration of sample-matched miRNA-mRNA profiles and pathway structure. - Jing Li 115; Chunquan Li 002; Junwei Han; Chunlong Zhang; Desi Shang; Qianlan Yao; Yunpeng Zhang; Yanjun Xu; Wei Liu 187; Meng Zhou 003; Haixiu Yang; Fei Su; et al. (J. Biomed. Informatics, 2014)

Characterizing and optimizing human anticancer drug targets based on topological properties in the context of biological pathways. - Jian Zhang 084; Yan Wang 023; Desi Shang; Fulong Yu; Wei Liu 187; Yan Zhang; Chenchen Feng; Qiuyu Wang; Yanjun Xu; Yuejuan Liu; Xuefeng Bai 002; Xuecang Li; et al. (J. Biomed. Informatics, 2015)

CancerSEA: a cancer single-cell state atlas. - Huating Yuan; Min Yan; Guanxiong Zhang; Wei Liu 187; Chunyu Deng; Gaoming Liao; Liwen Xu; Tao Luo; Haoteng Yan; Zhilin Long; Aiai Shi; Tingting Zhao; et al. (Nucleic Acids Res., 2019)

HiFreSP: A novel high-frequency sub-pathway mining approach to identify robust prognostic gene signatures. - Meng Li; Jianmei Zhao; Xuecang Li; Yang Chen; Chenchen Feng; Fengcui Qian; Yuejuan Liu; Jian Zhang 084; Jianzhong He; Bo Ai 005; Ziyu Ning; Wei Liu 187; et al. (Briefings Bioinform., 2020)

Integration of gene interaction information into a reweighted Lasso-Cox model for accurate survival prediction. - Wei Wang; Wei Liu 187 (Bioinform., 2021)

FunlncModel: integrating multi-omic features from upstream and downstream regulatory networks into a machine learning framework to identify functional lncRNAs. - Yan-Yu Li; Fengcui Qian; Guo-Rui Zhang; Xue-Cang Li; Li-Wei Zhou; Zheng-Min Yu; Wei Liu 187; Qiu-Yu Wang; Chunquan Li 002 (Briefings Bioinform., 2024)