Undesignable RNA Structure Identification via Rival Structure Generation and Structure Decomposition. - Tianshuo Zhou; Wei Yu Tang; David H. Mathews; Liang Huang 001 (RECOMB, 2024)

Messenger and Non-Coding RNA Design via Expected Partition Function and Continuous Optimization. - Ning Dai; Wei Yu Tang; Tianshuo Zhou; David H. Mathews; Liang Huang 001 (CoRR, 2024)

Scalable Identification of Minimum Undesignable RNA Motifs on Loop-Pair Graphs. - Tianshuo Zhou; Wei Yu Tang; David H. Mathews; Liang Huang 001 (CoRR, 2024)

Sampling-based Continuous Optimization with Coupled Variables for RNA Design. - Wei Yu Tang; Ning Dai; Tianshuo Zhou; David H. Mathews; Liang Huang 001 (CoRR, 2024)

Scalable and Interpretable Identification of Minimal Undesignable RNA Structure Motifs with Rotational Invariance. - Tianshuo Zhou; Apoorv Malik; Wei Yu Tang; David H. Mathews; Liang Huang 001 (RECOMB, 2025)