Reconciling Gene Trees with Apparent Polytomies. - Wen-Chieh Chang 002; Oliver Eulenstein (COCOON, 2006)

Generalized Binary Tanglegrams: Algorithms and Applications. - Mukul S. Bansal; Wen-Chieh Chang 002; Oliver Eulenstein; David Fernández-Baca (BICoB, 2009)

A scalable parallelization of the gene duplication problem. - André Wehe; Wen-Chieh Chang 002; Oliver Eulenstein; Srinivas Aluru (J. Parallel Distributed Comput., 2010)

Mining Biological Interaction Networks Using Weighted Quasi-Bicliques. - Wen-Chieh Chang 002; Sudheer Vakati; Roland Krause; Oliver Eulenstein (ISBRA, 2011)

An ILP solution for the gene duplication problem. - Wen-Chieh Chang 002; J. Gordon Burleigh; David Fernández-Baca; Oliver Eulenstein (BMC Bioinform., 2011)

Exploring biological interaction networks with tailored weighted quasi-bicliques. - Wen-Chieh Chang 002; Sudheer Vakati; Roland Krause; Oliver Eulenstein (BMC Bioinform., 2012)

Exact solutions for species Tree Inference from discordant gene Trees. - Wen-Chieh Chang 002; Pawel Górecki 001; Oliver Eulenstein (J. Bioinform. Comput. Biol., 2013)