Global screening of potential Candida albicans biofilm-related transcription factors via network comparison. - Yu-Chao Wang; Chung-Yu Lan; Wen-Ping Hsieh; Luis A. Murillo; Nina Agabian; Bor-Sen Chen (BMC Bioinform., 2010)

Kernel density weighted loess normalization improves the performance of detection within asymmetrical data. - Wen-Ping Hsieh; Tzu-Ming Chu; Yu-Min Lin; Russell D. Wolfinger (BMC Bioinform., 2011)

A novel method to identify cooperative functional modules: study of module coordination in the Saccharomyces cerevisiae cell cycle. - Jeh-Ting Hsu; Chien Hua Peng; Wen-Ping Hsieh; Chung-Yu Lan; Chuan Yi Tang (BMC Bioinform., 2011)

Simpute: A Simple Genotype Imputation Method. - Yen Jen Lin; Chun-Tien Chang; Chuan Yi Tang; Wen-Ping Hsieh (CISIS, 2012)

Interspecies protein-protein interaction network construction for characterization of host-pathogen interactions: a Candida albicans-zebrafish interaction study. - Yu-Chao Wang; Che Lin; Ming-Ta Chuang; Wen-Ping Hsieh; Chung-Yu Lan; Yung-Jen Chuang; Bor-Sen Chen (BMC Syst. Biol., 2013)

Robustness analysis on interspecies interaction network for iron and glucose competition between Candida albicans and zebrafish during infection. - Che Lin; Chin-Nan Lin; Yu-Chao Wang; Fang-Yu Liu; Yu-Wen Chien; Yung-Jen Chuang; Chung-Yu Lan; Wen-Ping Hsieh; Bor-Sen Chen (BMC Syst. Biol., 2014)

The role of TGF-β signaling and apoptosis in innate and adaptive immunity in zebrafish: a systems biology approach. - Che Lin; Chin-Nan Lin; Yu-Chao Wang; Fang-Yu Liu; Yung-Jen Chuang; Chung-Yu Lan; Wen-Ping Hsieh; Bor-Sen Chen (BMC Syst. Biol., 2014)

MetaSMC: a coalescent-based shotgun sequence simulator for evolving microbial populations. - Ki-Hok Liao; Wing-Kai Hon; Chuan Yi Tang; Wen-Ping Hsieh (Bioinform., 2019)