Computing Configuration Space Obstacles using Polynomial Transforms. - Wenjie Shu; Zhiqiang Zheng 005 (ICRA, 2004)

Selection of antisense oligonucleotides based on multiple predicted target mRNA structures. - Xiaochen Bo; Shaoke Lou; Daochun Sun; Wenjie Shu; Jing Yang; Shengqi Wang (BMC Bioinform., 2006)

RDMAS: a web server for RNA deleterious mutation analysis. - Wenjie Shu; Xiaochen Bo; Rujia Liu; Dongsheng Zhao; Zhiqiang Zheng 005; Shengqi Wang (BMC Bioinform., 2006)

RSRE: RNA structural robustness evaluator. - Wenjie Shu; Xiaochen Bo; Zhiqiang Zheng 005; Shengqi Wang (Nucleic Acids Res., 2007)

A novel representation of RNA secondary structure based on element-contact graphs. - Wenjie Shu; Xiaochen Bo; Zhiqiang Zheng 005; Shengqi Wang (BMC Bioinform., 2008)

EvoRSR: an integrated system for exploring evolution of RNA structural robustness. - Wenjie Shu; Ming Ni; Xiaochen Bo; Zhiqiang Zheng 005; Shengqi Wang (BMC Bioinform., 2009)

Constrained multi-objective evolutionary algorithm based on decomposition for environmental/economic dispatch. - Jianping Yin; Chixin Xiao; Xun Zhou; Zhigang Xue; Mingyu Yi; Wenjie Shu (CICA, 2014)

De novo identification of replication-timing domains in the human genome by deep learning. - Feng Liu 054; Chao Ren; Hao Li 035; Pingkun Zhou; Xiaochen Bo; Wenjie Shu (Bioinform., 2016)

BiRen: predicting enhancers with a deep-learning-based model using the DNA sequence alone. - Bite Yang; Feng Liu 054; Chao Ren; Zhangyi Ouyang; Ziwei Xie; Xiaochen Bo; Wenjie Shu (Bioinform., 2017)

Deep Learning and Its Applications in Biomedicine. - Chensi Cao; Feng Liu 054; Hai Tan; Deshou Song; Wenjie Shu; Weizhong Li 001; Yiming Zhou; Xiaochen Bo; Zhi Xie (Genom. Proteom. Bioinform., 2018)

LIVE: a manually curated encyclopedia of experimentally validated interactions of lncRNAs. - Gaole An; Jiaqi Sun; Chao Ren; Zhangyi Ouyang; Lingyun Zhu; Xiaochen Bo; Shaoliang Peng; Wenjie Shu (Database J. Biol. Databases Curation, 2019)

Predicting CRISPR-Cas9 Off-target with Self-supervised Neural Networks. - Dong Chen 013; Wenjie Shu; Shaoliang Peng (BIBM, 2020)

Predicting functional elements and variants effects in non-coding regions based on deep learning. - Yunhao Liu 001; Shaoliang Peng; Wenjie Shu; Bin Jiang 006; Chao Yang 015; Kun Xie (HealthCom, 2020)

LME SSD: Light-Multi Extract modules based Single Shot Detector for Resource-Restricted Usages. - Yang Du; Jun Li; Na Zhang; Guorui Yuan; Gaowu Xu; Wenjie Shu (ICIAI, 2020)

Design of prime-editing guide RNAs with deep transfer learning. - Feng Liu 054; Shuhong Huang; Jiongsong Hu; Xiaozhou Chen; Ziguo Song; Junguo Dong; Yao Liu; Xingxu Huang; Shengqi Wang; Xiaolong Wang; Wenjie Shu (Nat. Mac. Intell., 2023)

DDA: A dual-domain attention plug-and-play prior for pansharpening. - Wenjie Shu; Zien Zhang (Tiny Papers @ ICLR, 2024)

Exploring the Low-Pass Filtering Behavior in Image Super-Resolution. - Haoyu Deng; Zijing Xu; Yule Duan; Xiao Wu; Wenjie Shu; Liang-Jian Deng (ICML, 2024)

VideoGen-of-Thought: A Collaborative Framework for Multi-Shot Video Generation. - Mingzhe Zheng; Yongqi Xu; Haojian Huang; Xuran Ma; Yexin Liu; Wenjie Shu; Yatian Pang; Feilong Tang; Qifeng Chen; Harry Yang; Ser-Nam Lim (CoRR, 2024)

CMT: Cross Modulation Transformer With Hybrid Loss for Pansharpening. - Wenjie Shu; Hong-Xia Dou; Rui Wen; Xiao Wu; Liang-Jian Deng (IEEE Geosci. Remote. Sens. Lett., 2024)

LightGen: Efficient Image Generation through Knowledge Distillation and Direct Preference Optimization. - Xianfeng Wu; Yajing Bai; Haoze Zheng; Harold Haodong Chen; Yexin Liu; Zihao Wang; Xuran Ma; Wenjie Shu; Xianzu Wu; Harry Yang; Ser-Nam Lim (CoRR, 2025)

Temporal Regularization Makes Your Video Generator Stronger. - Harold Haodong Chen; Haojian Huang; Xianfeng Wu; Yexin Liu; Yajing Bai; Wenjie Shu; Harry Yang; Ser-Nam Lim (CoRR, 2025)