Mimvec: a deep learning approach for analyzing the human phenome. - Mingxin Gan; Wenran Li; Wanwen Zeng; Xiaojian Wang; Rui Jiang 001 (BMC Syst. Biol., 2017)

Comparative analysis of models in predicting the effects of SNPs on TF-DNA binding using large-scale in vitro and in vivo data. - Dongmei Han; Yurun Li; Linxiao Wang; Xuan Liang; Yuanyuan Miao; Wenran Li; Sijia Wang; Zhen Wang (Briefings Bioinform., 2024)

DeepMethyGene: a deep-learning model to predict gene expression using DNA methylations. - Yuyao Yan; Xinyi Chai; Jiajun Liu; Sijia Wang; Wenran Li; Tao Huang (BMC Bioinform., 2025)