ExamPle: explainable deep learning framework for the prediction of plant small secreted peptides. - Zhongshen Li; Junru Jin; Yu Wang; Wentao Long; Yuanhao Ding; Haiyan Hu; Leyi Wei (Bioinform., 2023)

CoraL: interpretable contrastive meta-learning for the prediction of cancer-associated ncRNA-encoded small peptides. - Zhongshen Li; Junru Jin; Wenjia He; Wentao Long; Haoqing Yu; Xin Gao 001; Kenta Nakai; Quan Zou 001; Leyi Wei (Briefings Bioinform., 2023)

PLPMpro: Enhancing promoter sequence prediction with prompt-learning based pre-trained language model. - Zhongshen Li; Junru Jin; Wentao Long; Leyi Wei (Comput. Biol. Medicine, 2023)