Estimating Genome-Wide Copy Number Using Allele-Specific Mixture Models. - Wenyi Wang 001; Benilton S. Carvalho; Nathaniel D. Miller; Jonathan Pevsner; Aravinda Chakravarti; Rafael A. Irizarry (J. Comput. Biol., 2008)

Identification of rare DNA variants in mitochondrial disorders with improved array-based sequencing. - Wenyi Wang 001; Peidong Shen; Sreedevi Thiyagarajan; Shengrong Lin; Curtis J. Palm; Rita Horvath; Thomas Klopstock; David Cutler; Lynn Pique; Iris Schrijver; Ronald W. Davis; Michael Mindrinos; et al. (Nucleic Acids Res., 2011)

Integrating multi-platform genomic data using hierarchical Bayesian relevance vector machines. - Sanvesh Srivastava; Wenyi Wang 001; Pascal O. Zinn; Rivka R. Colen; Veerabhadran Baladandayuthapani (GENSiPS, 2012)

SRMA: an R package for resequencing array data analysis. - Nianxiang Zhang; Yan Xu; Martin O'Hely; Terence P. Speed; Curt Scharfe; Wenyi Wang 001 (Bioinform., 2012)

DeMix: deconvolution for mixed cancer transcriptomes using raw measured data. - Jaeil Ahn; Ying Yuan; Giovanni Parmigiani; Milind B. Suraokar; Lixia Diao; Ignacio I. Wistuba; Wenyi Wang 001 (Bioinform., 2013)

Integrating multi-platform genomic data using hierarchical Bayesian relevance vector machines. - Sanvesh Srivastava; Wenyi Wang 001; Ganiraju Manyam; Carlos Ordonez 001; Veerabhadran Baladandayuthapani (EURASIP J. Bioinform. Syst. Biol., 2013)

FamSeq: A Variant Calling Program for Family-Based Sequencing Data Using Graphics Processing Units. - Gang Peng; Yu Fan; Wenyi Wang 001 (PLoS Comput. Biol., 2014)

Bayesian variable selection for binary outcomes in high-dimensional genomic studies using non-local priors. - Amir Nikooienejad; Wenyi Wang 001; Valen E. Johnson (Bioinform., 2016)

The evolutionary history of 2,658 cancers. - Moritz Gerstung; Clemency Jolly; Ignaty Leshchiner; Stefan C. Dentro; Santiago Gonzalez; Thomas J. Mitchell; Yulia Rubanova; Pavana Anur; Kaixian Yu; Maxime Tarabichi; Amit G. Deshwar; Jeff Wintersinger; et al. (Nat., 2020)