Evol and ProDy for bridging protein sequence evolution and structural dynamics. - Ahmet Bakan; Anindita Dutta; Wenzhi Mao; Ying Liu; Chakra Chennubhotla 001; Timothy R. Lezon; Ivet Bahar (Bioinform., 2014)

ATPase Subdomain IA Is a Mediator of Interdomain Allostery in Hsp70 Molecular Chaperones. - Ignacio J. General; Ying Liu; Mandy E. Blackburn; Wenzhi Mao; Lila M. Gierasch; Ivet Bahar (PLoS Comput. Biol., 2014)

Comparative study of the effectiveness and limitations of current methods for detecting sequence coevolution. - Wenzhi Mao; Cihan Kaya; Anindita Dutta; Amnon Horovitz; Ivet Bahar (Bioinform., 2015)

Identification of residue pairing in interacting β-strands from a predicted residue contact map. - Wenzhi Mao; Tong Wang 014; Wenxuan Zhang; Haipeng Gong (BMC Bioinform., 2018)

Improved fragment sampling for ab initio protein structure prediction using deep neural networks. - Tong Wang 014; Yanhua Qiao; Wenze Ding; Wenzhi Mao; Yaoqi Zhou; Haipeng Gong (Nat. Mach. Intell., 2019)

RDb2C2: an improved method to identify the residue-residue pairing in β strands. - Di Shao; Wenzhi Mao; Yaoguang Xing; Haipeng Gong (BMC Bioinform., 2020)

AmoebaContact and GDFold as a pipeline for rapid de novo protein structure prediction. - Wenzhi Mao; Wenze Ding; Yaoguang Xing; Haipeng Gong (Nat. Mach. Intell., 2020)