Syntactic-Semantic Tagging of Medical Texts: The Multi-TALE Project - Werner Ceusters; Peter Spyns; Georges De Moor; Willy Martin (IOS Press, 1998)

A Comprehensive Approach to Developing and Integrating Multilingual Classifications: GALEN's Classification Workbench. - Alan L. Rector; Robert H. Baud; Werner Ceusters; A. M. W. Claassen; Jean Marie Rodrigues; Jeremy Rogers; Angelo Rossi Mori; Egbert J. van der Haring; W. D. Solomon; Pieter E. Zanstra (AMIA, 1998)

From syntactic-semantic tagging to knowledge discovery in medical texts. - Werner Ceusters; Peter Spyns; Georges De Moor (Int. J. Medical Informatics, 1998)

Reconciling users' needs and formal requirements: issues in developing a reusable ontology for medicine. - Alan L. Rector; Pieter E. Zanstra; W. D. Solomon; Jeremy Rogers; Robert H. Baud; Werner Ceusters; A. M. W. Claassen; J. Kirby; Jean Marie Rodrigues; Angelo Rossi Mori; Egbert J. van der Haring; Judith C. Wagner (IEEE Trans. Inf. Technol. Biomed., 1998)

Syntactic-semantic tagging as a mediator between linguistic representations and formal models: an exercise in linking SNOMED to GALEN. - Werner Ceusters; Jeremy Rogers; Fabrizio Consorti; Angelo Rossi Mori (Artif. Intell. Medicine, 1999)

Some Ontology Engineering Processes and Their Supporting Technologies. - Alan Flett; Mariana Casella dos Santos; Werner Ceusters (EKAW, 2002)

A Novel View on Information Content of Concepts in Extremely Large Ontologies. - Carl Van Buggenhout; Werner Ceusters (MIE, 2003)

Using Cross-Lingual Information to Cope with Underspecification in Formal Ontologies. - Werner Ceusters; Ignace Desimpel; Barry Smith 001; Stefan Schulz 001 (MIE, 2003)

LinkSuite™: Formally Robust Ontology-Based Data and Information Integration. - Werner Ceusters; Barry Smith 001; James Matthew Fielding (DILS, 2004)

Ontological Theory for Ontological Engineering: Biomedical Systems Information Integration. - James Matthew Fielding; Jonathan Simon; Werner Ceusters; Barry Smith 001 (KR, 2004)

Ontology-Based Error Detection in SNOMED-CT®. - Werner Ceusters; Barry Smith 001; Anand Kumar 005; Christoffel Dhaen (MedInfo, 2004)

Ontology-assisted database integration to support natural language processing and biomedical data-mining. - Jean-Luc Verschelde; Mariana Casella dos Santos; Tom Deray; Barry Smith 001; Werner Ceusters (J. Integr. Bioinform., 2004)

An Ontology-Based Methodology for the Migration of Biomedical Terminologies to Electronic Health Records. - Barry Smith 001; Werner Ceusters (AMIA, 2005)

Wüsteria. - Barry Smith 001; Werner Ceusters; Rita Temmerman (MIE, 2005)

Tracking Referents in Electronic Health Records. - Werner Ceusters; Barry Smith 001 (MIE, 2005)

The Significance of SNODENT. - Louis J. Goldberg; Werner Ceusters; John Eisner; Barry Smith 001 (MIE, 2005)

A novel view on information content of concepts in a large ontology and a view on the structure and the quality of the ontology. - Carl Van Buggenhout; Werner Ceusters (Int. J. Medical Informatics, 2005)

A Realism-Based Approach to the Evolution of Biomedical Ontologies. - Werner Ceusters; Barry Smith 001 (AMIA, 2006)

Towards A Realism-Based Metric for Quality Assurance in Ontology Matching. - Werner Ceusters (FOIS, 2006)

Towards a Reference Terminology for Ontology Research and Development in the Biomedical Domain. - Barry Smith 001; Waclaw Kusnierczyk; Daniel Schober; Werner Ceusters (KR-MED, 2006)

Referent Tracking: The Problem of Negative Findings. - Werner Ceusters; Peter L. Elkin; Barry Smith 001 (MIE, 2006)

HL7 RIM: An Incoherent Standard. - Barry Smith 001; Werner Ceusters (MIE, 2006)

OnToContent 2006 PC Co-chairs' Message. - Mustafa Jarrar; Claude Ostyn; Werner Ceusters; Andreas Persidis (OTM Workshops (2), 2006)

Strategies for referent tracking in electronic health records. - Werner Ceusters; Barry Smith 001 (J. Biomed. Informatics, 2006)

Referent tracking for treatment optimisation in schizophrenic patients: A case study in applying philosophical ontology to diagnostic algorithms. - Werner Ceusters; Barry Smith 001 (J. Web Semant., 2006)

Would SNOMED CT benefit from Realism-Based Ontology Evolution? - Werner Ceusters; Kent A. Spackman; Barry Smith 001 (AMIA, 2007)

A Middleware Approach to Integrate Referent Tracking in EHR Systems. - Shahid Manzoor; Werner Ceusters; Ron Rudnicki (AMIA, 2007)

What Particulars are Referred to in Electronic Health Record Data? A Case Study in Integrating Referent Tracking into an EHR Application. - Ron Rudnicki; Werner Ceusters; Shahid Manzoor; Barry Smith 001 (AMIA, 2007)

Referent Tracking and its Applications. - Werner Ceusters; Barry Smith 001 (I3, 2007)

Reconciliation of Ontology and Terminology to Cope with Linguistics. - Robert H. Baud; Werner Ceusters; Patrick Ruch; Anne-Marie Rassinoux; Christian Lovis; Antoine Geissbühler (MedInfo, 2007)

How to Track Absolutely Everything. - Werner Ceusters; Shahid Manzoor (OIC, 2007)

Introduction: Ontologies, Semantic Technologies, and Intelligence. - Terry L. Janssen; Leo Obrst; Werner Ceusters (OIC, 2007)

Ontologies, Semantic Technologies, and Intelligence: Looking Toward the Future. - Leo Obrst; Werner Ceusters; Terry L. Janssen (OIC, 2007)

OnToContent 2007 PC Co-chairs' Message. - Mustafa Jarrar; Andreas Schmidt 007; Claude Ostyn; Werner Ceusters (OTM Workshops (1), 2007)

Implementation of a Referent Tracking System. - Shahid Manzoor; Werner Ceusters; Ron Rudnicki (Int. J. Heal. Inf. Syst. Informatics, 2007)

Negative findings in electronic health records and biomedical ontologies: A realist approach. - Werner Ceusters; Peter L. Elkin; Barry Smith 001 (Int. J. Medical Informatics, 2007)

Referent tracking for Digital Rights Management. - Werner Ceusters; Barry Smith 001 (Int. J. Metadata Semant. Ontologies, 2007)

Introducing Realist Ontology for the Representation of Adverse Events. - Werner Ceusters; Maria Capolupo; Georges De Moor; Jos Devlies (FOIS, 2008)

OnToContent+QSI 2008 PC Co-chairs' Message. - Ramón F. Brena; Andreas Schmidt 007; Mustafa Jarrar; Werner Ceusters; Francisco J. Cantu (OTM Workshops, 2008)

An Evolutionary Approach to the Representation of Adverse Events. - Werner Ceusters; Maria Capolupo; Barry Smith 001; Georges De Moor (MIE, 2009)

Applying evolutionary terminology auditing to the Gene Ontology. - Werner Ceusters (J. Biomed. Informatics, 2009)

A Unified Framework for Biomedical Terminologies and Ontologies. - Werner Ceusters; Barry Smith 001 (MedInfo, 2010)

Introducing Ontological Realism for Semi-Supervised Detection and Annotation of Operationally Significant Activity in Surveillance Videos. - Werner Ceusters; Jason J. Corso; Yun Fu 001; Michalis Petropoulos; Venkat N. Krovi (STIDS, 2010)

Ontological realism: A methodology for coordinated evolution of scientific ontologies. - Barry Smith 001; Werner Ceusters (Appl. Ontology, 2010)

Foundations for a realist ontology of mental disease. - Werner Ceusters; Barry Smith 001 (J. Biomed. Semant., 2010)

The Emotion Ontology: Enabling Interdisciplinary Research in the Affective Sciences. - Janna Hastings; Werner Ceusters; Barry Smith 001; Kevin Mulligan (CONTEXT, 2011)

Dispositions and Processes in the Emotion Ontology. - Janna Hastings; Werner Ceusters; Barry Smith 001; Kevin Mulligan (ICBO, 2011)

AEO: A Realism-Based Biomedical Ontology for the Representation of Adverse Events. - Yongqun He; Zuoshuang Xiang; Sirarat Sarntivijai; Luca Toldo; Werner Ceusters (ICBO, 2011)

Representing Local Identifiers in a Referent-Tracking System. - William R. Hogan; Swetha Garimalla; Shariq A. Tariq; Werner Ceusters (ICBO, 2011)

SNOMED CT's RF2: Is the Future Bright? - Werner Ceusters (MIE, 2011)

Domain and Application Ontologies for Medically Unexplained Syndromes. - Kristina Doing-Harris; Stéphane M. Meystre; Matthew H. Samore; Werner Ceusters (AMIA, 2012)

Wanting what we don't want to want: Representing addiction in interoperable bio-ontologies. - Janna Hastings; Nicolas Le Novère; Werner Ceusters; Kevin Mulligan; Barry Smith 001 (ICBO, 2012)

An Information Artifact Ontology Perspective on Data Collections and Associated Representational Artifacts. - Werner Ceusters (MIE, 2012)

Applying Ontological Realism to Medically Unexplained Syndromes. - Kristina Doing-Harris; Stéphane M. Meystre; Matthew H. Samore; Werner Ceusters (MedInfo, 2013)

Applying the Realism-Based Ontology-Versioning Method for Tracking Changes in the Basic Formal Ontology. - Selja Seppälä; Barry Smith 001; Werner Ceusters (FOIS, 2014)

Pain Assessment Terminology in the NCBO BioPortal: Evaluation and Recommendations. - Werner Ceusters (ICBO, 2014)

Clinical Data Wrangling using Ontological Realism and Referent Tracking. - Werner Ceusters; Chiun Yu Hsu; Barry Smith 001 (ICBO, 2014)

Replacing EHR structured data with explicit representations. - Jonathan P. Bona; Werner Ceusters (ICBO, 2015)

An ontological analysis of diagnostic assertions in electronic healthcare records. - Werner Ceusters; William R. Hogan (ICBO, 2015)

Aboutness: towards foundations for the Information Artifact Ontology. - Barry Smith 001; Werner Ceusters (ICBO, 2015)

Biomarkers in the Ontology for General Medical Science. - Werner Ceusters; Barry Smith 001 (MIE, 2015)

Identifying Missing Finding Site Relations in SNOMED CT. - Jonathan P. Bona; Werner Ceusters (AMIA, 2016)

Analyzing SNOMED CT's Historical Data: Pitfalls and Possibilities. - Werner Ceusters; Jonathan P. Bona (AMIA, 2016)

Ontologies of Dynamical Systems and Verifiable Ontology-Based Computation: Towards a Haskell-Based Implementation of Referent Tracking. - Thomas Bittner; Jonathan P. Bona; Werner Ceusters (FOIS, 2016)

Representing SNOMED CT Concept Evolutions using Process Profiles. - Werner Ceusters; Jonathan P. Bona (JOWO@FOIS, 2016)

Analysis of SNOMED "Bleeding" Concepts & Terms. - Jonathan P. Bona; Selja Seppälä; Werner Ceusters (ICBO/BioCreative, 2016)

Functions in Basic Formal Ontology. - Andrew D. Spear; Werner Ceusters; Barry Smith 001 (Appl. Ontology, 2016)

Diagnosis, misdiagnosis, lucky guess, hearsay, and more: an ontological analysis. - William R. Hogan; Werner Ceusters (J. Biomed. Semant., 2016)

Improving the 'Fitness for Purpose' of Common Data Models through Realism Based Ontology. - Jonathan C. Blaisure; Werner Ceusters (AMIA, 2017)

The Problems of Realism-Based Ontology Design: a Case Study in Creating Definitions for an Application Ontology for Diabetes Camps. - James C. Schuler; Werner Ceusters (AMIA, 2017)

Scrutinizing the Relationships Between SNOMED CT Concepts and Semantic Tags. - Jonathan P. Bona; Werner Ceusters (ICBO, 2017)

Classifying Processes and Basic Formal Ontology. - Mustafa Jarrar; Werner Ceusters (ICBO, 2017)

A Realism-Based View on Counts in OMOP's Common Data Model. - Werner Ceusters; Jonathan Blaisure (pHealth, 2017)

Enhancing the Representational Power of i2b2 through Referent Tracking. - Jonathan C. Blaisure; Werner Ceusters (AMIA, 2018)

Caveats for the Use of the Active Problem List as Ground Truth for Decision Support. - Werner Ceusters; Jonathan Blaisure (EFMI-STC, 2018)

On Defining Bruxism. - Werner Ceusters; Barry Smith 001 (MIE, 2018)

Mismatches between major subhierarchies and semantic tags in SNOMED CT. - Jonathan P. Bona; Werner Ceusters (J. Biomed. Informatics, 2018)

Warranted Diagnosis. - David Limbaugh; David Kasmier; Werner Ceusters; Barry Smith 001 (ICBO, 2019)

Foundations for a Realism-based Drug Repurposing Ontology. - James Schuler; William Mangione; Ram Samudrala; Werner Ceusters (ICBO, 2019)

Expanding Evolutionary Terminology Auditing with Historic Formal and Linguistic Intensions: A Case Study in SNOMED CT. - Werner Ceusters; Sarah Mullin (MedInfo, 2019)

Foundations for a Realism-Based Ontology of Protein Aggregates. - Lauren Wishnie; Alexander P. Cox; Alexander D. Diehl; Werner Ceusters (ICBO/ODLS, 2020)

Challenges in Realism-Based Ontology Design: A Case Study on Creating an Ontology for Motivational Learning Theories. - Irshad Ally; Werner Ceusters (ICBO, 2021)

Axiomatizing SNOMED CT Disorders: Should There Be Room for Interpretation? - Werner Ceusters; Anuwat Pengput (FOIS, 2023)

An Extendible Realism-Based Ontology for Kinship. - Michael Rabenberg; Anuwat Pengput; Werner Ceusters (ICBO, 2023)

Setting the Scene to Link SNOMED CT to Realism-Based Ontologies. - Anuwat Pengput; Werner Ceusters (MedInfo, 2023)

Fiat Surfaces in the Basic Formal Ontology. - Michael Rabenberg; Werner Ceusters (FOIS, 2024)