Evaluating Attribution for Graph Neural Networks. - Benjamín Sánchez-Lengeling; Jennifer N. Wei; Brian K. Lee; Emily Reif; Peter Wang; Wesley Wei Qian; Kevin McCloskey; Lucy J. Colwell; Alexander B. Wiltschko (NeurIPS, 2020)

Evolutionary Context-Integrated Deep Sequence Modeling for Protein Engineering. - Yunan Luo; Lam Vo; Hantian Ding; Yufeng Su; Yang Liu 097; Wesley Wei Qian; Huimin Zhao 007; Jian Peng 001 (RECOMB, 2020)

Batch equalization with a generative adversarial network. - Wesley Wei Qian; Cassandra Xia; Subhashini Venugopalan; Arunachalam Narayanaswamy; Michelle Dimon; George W. Ashdown; Jake Baum; Jian Peng 001; D. Michael Ando (Bioinform., 2020)

Energy-Inspired Molecular Conformation Optimization. - Jiaqi Guan; Wesley Wei Qian; Qiang Liu 001; Wei-Ying Ma; Jianzhu Ma; Jian Peng 001 (ICLR, 2022)

3D Equivariant Diffusion for Target-Aware Molecule Generation and Affinity Prediction. - Jiaqi Guan; Wesley Wei Qian; Xingang Peng; Yufeng Su; Jian Peng 001; Jianzhu Ma (ICLR, 2023)