From simulation data to conformational ensembles: Structure and dynamics-based methods. - Wilhelm Huisinga; Christoph Best; Rainer Roitzsch; Christof Schütte; Frank Cordes (J. Comput. Chem., 1999)

An Averaging Principle for Fast Degrees of Freedom Exhibiting Long-Term Correlations. - Christof Schütte; Jessika Walter; Carsten Hartmann; Wilhelm Huisinga (Multiscale Model. Simul., 2004)

Adaptive approach for nonlinear sensitivity analysis of reaction kinetics. - Illia Horenko; Sönke Lorenz; Christof Schütte; Wilhelm Huisinga (J. Comput. Chem., 2005)

Software Supported Modelling in Pharmacokinetics. - Regina Telgmann; Max von Kleist; Wilhelm Huisinga (CompLife, 2006)

Adaptive Approach for Modelling Variability in Pharmacokinetics. - Andrea Y. Weiße; Illia Horenko; Wilhelm Huisinga (CompLife, 2006)

Adaptive Discrete Galerkin Methods Applied to the Chemical Master Equation. - Peter Deuflhard; Wilhelm Huisinga; Tobias Jahnke; Michael Wulkow (SIAM J. Sci. Comput., 2008)

Quantifying uncertainty, variability and likelihood for ordinary differential equation models. - Andrea Y. Weiße; Richard H. Middleton; Wilhelm Huisinga (BMC Syst. Biol., 2010)

Drug-Class Specific Impact of Antivirals on the Reproductive Capacity of HIV. - Max von Kleist; Stephan Menz; Wilhelm Huisinga (PLoS Comput. Biol., 2010)

Error-controlled global sensitivity analysis of ordinary differential equations. - Andrea Y. Weiße; Wilhelm Huisinga (J. Comput. Phys., 2011)

Hybrid Stochastic-Deterministic Solution of the Chemical Master Equation. - Stephan Menz; Juan C. Latorre; Christof Schütte; Wilhelm Huisinga (Multiscale Model. Simul., 2012)

Estimating HIV-1 Fitness Characteristics from Cross-Sectional Genotype Data. - Sathej Gopalakrishnan; Hesam Montazeri; Stephan Menz; Niko Beerenwinkel; Wilhelm Huisinga (PLoS Comput. Biol., 2014)

Reinforcement learning and Bayesian data assimilation for model-informed precision dosing in oncology. - Corinna Maier; Niklas Hartung; Charlotte Kloft; Wilhelm Huisinga; Jana de Wiljes (CoRR, 2020)

Analysis of protrusion dynamics in amoeboid cell motility by means of regularized contour flows. - Daniel Schindler; Ted Moldenhawer; Maike Stange; Valentino Lepro; Carsten Beta; Matthias Holschneider; Wilhelm Huisinga (PLoS Comput. Biol., 2021)

Novel mathematical approach to accurately quantify 3D endothelial cell morphology and vessel geometry based on fluorescently marked endothelial cell contours: Application to the dorsal aorta of wild-type and Endoglin-deficient zebrafish embryos. - Daniel Seeler; Nastasja Grdseloff; Claudia Jasmin Rödel; Charlotte Kloft; Salim Abdelilah-Seyfried; Wilhelm Huisinga (PLoS Comput. Biol., 2024)

Index analysis: An approach to understand signal transduction with application to the EGFR signalling pathway. - Jane Knöchel; Charlotte Kloft; Wilhelm Huisinga (PLoS Comput. Biol., 2024)