Development of Gene Ontology Tool for Biological Interpretation of Genomic and Proteomic Data. - Weimin Feng; Geoffrey Wang; Barry Zeeberg; Kejiao Guo; Anthony T. Fojo; David W. Kane; William C. Reinhold; Samir Lababidi; John N. Weinstein; May D. Wang (AMIA, 2003)

AffyProbeMiner: a web resource for computing or retrieving accurately redefined Affymetrix probe sets. - Hongfang Liu; Barry Zeeberg; Gang Qu 001; Akif Günes Koru; Alessandro Ferrucci; Ari B. Kahn; Michael C. Ryan; Antej Nuhanovic; Peter J. Munson; William C. Reinhold; David W. Kane; John N. Weinstein (Bioinform., 2007)

CellMiner: A Database Tool for the NCI-60 Cancer Cell Lines. - Uma T. Shankavaram; Sudhir Varma; David W. Kane; Margot Sunshine; Krishna Chary; William C. Reinhold; John N. Weinstein (BIOCOMP, 2008)

RedundancyMiner: De-replication of redundant GO categories in microarray and proteomics analysis. - Barry Zeeberg; Hongfang Liu; Ari B. Kahn; Martin Ehler; Vinodh N. Rajapakse; Robert F. Bonner; Jacob D. Brown; Brian P. Brooks; Vladimir L. Larionov; William C. Reinhold; John N. Weinstein; Yves Pommier (BMC Bioinform., 2011)

Predicting expression-related features of chromosomal domain organization with network-structured analysis of gene expression and chromosomal location. - Vinodh N. Rajapakse; Wojciech Czaja; Yves Pommier; William C. Reinhold; Sudhir Varma (BCB, 2012)

rcellminer: exploring molecular profiles and drug response of the NCI-60 cell lines in R. - Augustin Luna; Vinodh N. Rajapakse; Fabricio G. Sousa; Jianjiong Gao; Nikolaus Schultz; Sudhir Varma; William C. Reinhold; Chris Sander; Yves Pommier (Bioinform., 2016)

CellMiner Cross-Database (CellMinerCDB) version 1.2: Exploration of patient-derived cancer cell line pharmacogenomics. - Augustin Luna; Fathi Elloumi; Sudhir Varma; Yanghsin Wang; Vinodh N. Rajapakse; Mirit I. Aladjem; Jacques Robert; Chris Sander; Yves Pommier; William C. Reinhold (Nucleic Acids Res., 2021)