A Structure-Based Search Engine for Phylogenetic Databases. - Huiyuan Shan; Katherine G. Herbert; William H. Piel; Dennis E. Shasha; Jason Tsong-Li Wang (SSDBM, 2002)

Phyloinformatics and Tree Networks. - William H. Piel (Computational Biology and Genome Informatics, 2003)

Requirements of Phylogenetic Databases. - Luay Nakhleh; Daniel P. Miranker; François Barbançon; William H. Piel; Michael J. Donoghue (BIBE, 2003)

TreeRank: A Similarity Measure for Nearest Neighbor Searching in Phylogenetic Databases. - Jason Tsong-Li Wang; Huiyuan Shan; Dennis E. Shasha; William H. Piel (SSDBM, 2003)

The Small-world Dynamics of Tree Networks and Data Mining in Phyloinformatics. - William H. Piel; Michael J. Sanderson; Michael J. Donoghue (Bioinform., 2003)

BIO-AJAX: An Extensible Framework for Biological Data Cleaning. - Katherine G. Herbert; Narain H. Gehani; William H. Piel; Jason Tsong-Li Wang; Cathy H. Wu (SIGMOD Rec., 2004)

Lineage Path Integration for Phylogenetic Resources. - Katherine G. Herbert; Shashikanth Pusapati; Jason Tsong-Li Wang; William H. Piel (SSDBM, 2005)

PhyloMiner: A Tool for Evolutionary Data Analysis. - Sen Zhang 007; Katherine G. Herbert; Jason T. L. Wang; William H. Piel; David R. B. Stockwell (SSDBM, 2006)

PhyloWidget: web-based visualizations for the tree of life. - Gregory E. Jordan; William H. Piel (Bioinform., 2008)

Bioinformatic Databases. - Katherine G. Herbert; Junilda Spirollari; Jason Tsong-Li Wang; William H. Piel; John D. Westbrook; Winona C. Barker; Zhang-Zhi Hu; Cathy H. Wu (Wiley Encyclopedia of Computer Science and Engineering, 2008)

The taxonomic name resolution service: an online tool for automated standardization of plant names. - Brad Boyle; Nicole Hopkins; Zhenyuan Lu; Juan Antonio Raygoza Garay; Dmitry Mozzherin; Tony Rees; Naim Matasci; Martha L. Narro; William H. Piel; Sheldon J. McKay; Sonya J. Lowry; Chris Freeland; et al. (BMC Bioinform., 2013)