Directional Derivatives for Extremal-Value Functions with Applications to the Completely Convex Case. - William Hogan (Oper. Res., 1973)

Representing the Aboutness of a Diagnosis. - William Hogan (MIE, 2018)

Abstractified Multi-instance Learning (AMIL) for Biomedical Relation Extraction. - William Hogan; Molly Huang; Yannis Katsis; Tyler Baldwin; Ho-Cheol Kim; Yoshiki Vazquez-Baeza; Andrew Bartko; Chun-Nan Hsu (AKBC, 2021)

BLAR: Biomedical Local Acronym Resolver. - William Hogan; Yoshiki Vazquez-Baeza; Yannis Katsis; Tyler Baldwin; Ho-Cheol Kim; Chun-Nan Hsu (BioNLP@NAACL-HLT, 2021)

Machine learning and natural language processing for classifying infant feeding status from clinical notes. - Dominick J. Lemas; Braeden Lewis; Simon Frank; Lauren Wright; Marina Magalhães; Ke Xu; Xinsong Du; Leslie Parker; Joy Elensi; Lindsay Thompson; William Hogan; Modave Francois (AMIA, 2022)

Fine-grained Contrastive Learning for Relation Extraction. - William Hogan; Jiacheng Li 003; Jingbo Shang (EMNLP, 2022)

An Overview of Distant Supervision for Relation Extraction with a Focus on Denoising and Pre-training Methods. - William Hogan (CoRR, 2022)

Open-world Semi-supervised Generalized Relation Discovery Aligned in a Real-world Setting. - William Hogan; Jiacheng Li 003; Jingbo Shang (EMNLP, 2023)

DAIL: Data Augmentation for In-Context Learning via Self-Paraphrase. - Dawei Li; Yaxuan Li; Dheeraj Mekala; Shuyao Li; Yulin Wang; Xueqi Wang; William Hogan; Jingbo Shang (CoRR, 2023)

MiDRED: An Annotated Corpus for Microbiome Knowledge Base Construction. - William Hogan; Andrew Bartko; Jingbo Shang; Chun-Nan Hsu (BioNLP@ACL, 2024)

READ: Improving Relation Extraction from an ADversarial Perspective. - Dawei Li; William Hogan; Jingbo Shang (NAACL-HLT (Findings), 2024)

Precision Rehabilitation for Patients Post-Stroke based on Electronic Health Records and Machine Learning. - Fengyi Gao; Xingyu Zhang; Sonish Sivarajkumar; Parker E. Denny; Bayan M. Aldhahwani; Shyam Visweswaran; Ryan Shi; William Hogan; Allyn Bove; Yanshan Wang (CoRR, 2024)

Entangled Relations: Leveraging NLI and Meta-analysis to Enhance Biomedical Relation Extraction. - William Hogan; Jingbo Shang (NAACL (Long Papers), 2025)