NAMD: a Parallel, Object-Oriented Molecular Dynamics Program. - Mark T. Nelson; William Humphrey; Attila Gürsoy; Andrew Dalke; Laxmikant V. Kalé; Robert D. Skeel; Klaus Schulten (Int. J. High Perform. Comput. Appl., 1996)

A Visual Computing Environment for Very Large Scale Biomolecular Modeling. - Michael Zeller; James C. Phillips; Andrew Dalke; William Humphrey; Klaus Schulten; Thomas S. Huang; Vladimir Pavlovic 001; Yunxin Zhao; Zion Lo; Stephen M. Chu; Rajeev Sharma (ASAP, 1997)

Optimization of Data-Parallel Field Expressions in the POOMA Framework. - William Humphrey; Steve Karmesin; Federico Bassetti; John Reynders (ISCOPE, 1997)

Generic Programming in POOMA and PETE. - James Crotinger; Julian Cummings; Scott Haney; William Humphrey; Steve Karmesin; John Reynders; Stephen Smith 002; Timothy J. Williams (Generic Programming, 1998)

Tecolote: An Object-Oriented Framework for Physics Development. - J. C. Marshall; L. A. Ankeny; S. P. Clancy; J. H. Hall; J. H. Heiken; K. S. Holian; Stephen R. Lee; G. R. McNamara; J. W. Painter; M. E. Zander; Julian Cummings; Scott Haney; et al. (ECOOP Workshops, 1998)

Particle Beam Dynamics Simulations Using the POOMA Framework. - William Humphrey; Robert D. Ryne; Timothy Cleland; Julian Cummings; Salman Habib; Graham Mark; Ji Qiang (ISCOPE, 1998)

Array Design and Expression Evaluation in POOMA II. - Steve Karmesin; James Crotinger; Julian Cummings; Scott Haney; William Humphrey; John Reynders; Stephen Smith 002; Timothy J. Williams (ISCOPE, 1998)