Research Paper: The Accuracy of Medication Data in an Outpatient Electronic Medical Record. - Michael M. Wagner 001; William R. Hogan (J. Am. Medical Informatics Assoc., 1996)

Clinical event monitoring at the University of Pittsburgh. - Michael M. Wagner 001; Marvin C. Pankaskie; William R. Hogan; Fu-Chiang Tsui; Stuart A. Eisenstadt; Eric Rodriguez; John K. Vries (AMIA, 1997)

Review: Accuracy of Data in Computer-based Patient Records. - William R. Hogan; Michael M. Wagner 001 (J. Am. Medical Informatics Assoc., 1997)

Mobile workers in healthcare and their information needs: are 2-way pagers the answer? - Stuart A. Eisenstadt; Michael M. Wagner 001; William R. Hogan; Marvin C. Pankaskie; Fu-Chiang Tsui; Wayne Wilbright (AMIA, 1998)

Optimal use of communication channels in clinical event monitoring. - William R. Hogan; Michael M. Wagner 001 (AMIA, 1998)

Preferences of interns and residents for E-mail, paging, or traditional methods for the delivery of different types of clinical information. - Michael M. Wagner 001; Stuart A. Eisenstadt; William R. Hogan; Marvin C. Pankaskie (AMIA, 1998)

The use of an explanation algorithm in a clinical event monitor. - William R. Hogan; Michael M. Wagner 001 (AMIA, 1999)

A feasibility study of two methods for end-user configuration of a clinical event monitor. - Fu-Chiang Tsui; Michael M. Wagner 001; Wayne Wilbright; Aaron Tse; William R. Hogan (AMIA, 1999)

Experience with Message Format and Code Set Standards for Early Warning Public Health Surveillance Systems. - William R. Hogan; Michael M. Wagner 001; Fu-Chiang Tsui (AMIA, 2002)

Telephone Triage: A Timely Data Source for Surveillance of Influenza-like Diseases. - Jeremy U. Espino; William R. Hogan; Michael M. Wagner 001 (AMIA, 2003)

Detection of Pediatric Respiratory and Gastrointestinal Outbreaks from Free-Text Chief Complaints. - Oleg Ivanov; Per H. Gesteland; William R. Hogan; Michael B. Mundorff; Michael M. Wagner 001 (AMIA, 2003)

A Framework for Infection Control Surveillance Using Association Rules. - Lili Ma; Fu-Chiang Tsui; William R. Hogan; Michael M. Wagner 001; Haobo Ma (AMIA, 2003)

Detection of Outbreaks from Time Series Data Using Wavelet Transform. - Jun Zhang; Fu-Chiang Tsui; Michael M. Wagner 001; William R. Hogan (AMIA, 2003)

Research Paper: Detection of Pediatric Respiratory and Diarrheal Outbreaks from Sales of Over-the-counter Electrolyte Products. - William R. Hogan; Fu-Chiang Tsui; Oleg Ivanov; Per H. Gesteland; Shaun J. Grannis; J. Marc Overhage; J. Michael Robinson; Michael M. Wagner 001 (J. Am. Medical Informatics Assoc., 2003)

Application of Information Technology: Design of a National Retail Data Monitor for Public Health Surveillance. - Michael M. Wagner 001; J. Michael Robinson; Fu-Chiang Tsui; Jeremy U. Espino; William R. Hogan (J. Am. Medical Informatics Assoc., 2003)

Analysis of Web Access Logs for Surveillance of Influenza. - Heather A. Johnson; Michael M. Wagner 001; William R. Hogan; Wendy W. Chapman; Robert T. Olszewski; John N. Dowling; Gary Barnas (MedInfo, 2004)

Bayesian Biosurveillance of Disease Outbreaks. - Gregory F. Cooper; Denver Dash; John D. Levander; Weng-Keen Wong; William R. Hogan; Michael M. Wagner 001 (UAI, 2004)

An Evaluation of Three Policies for Updating Product Categories in the National Retail Data Monitor. - William R. Hogan; Garrick L. Wallstrom; Michael M. Wagner 001 (AMIA, 2005)

A Multivariate Procedure for Identifying Correlations between Diagnoses and Over-the-counter Products from Historical Datasets. - Ran Li; Garrick L. Wallstrom; William R. Hogan (AMIA, 2005)

Algorithms for rapid outbreak detection: a research synthesis. - David L. Buckeridge; Howard S. Burkom; Murray Campbell; William R. Hogan; Andrew W. Moore 001 (J. Biomed. Informatics, 2005)

Unsupervised clustering of over-the-counter healthcare products into product categories. - Garrick L. Wallstrom; William R. Hogan (J. Biomed. Informatics, 2007)

Integrating a Commuting Model with the Bayesian Aerosol Release Detector. - Aurel Cami; Garrick L. Wallstrom; William R. Hogan (BioSecure, 2008)

A Temporal Extension of the Bayesian Aerosol Release Detector. - Xiaohui Kong; Garrick L. Wallstrom; William R. Hogan (BioSecure, 2008)

EPO-KB: a searchable knowledge base of biomarker to protein links. - Jonathan L. Lustgarten; Chad Kimmel; Henrik Ryberg; William R. Hogan (Bioinform., 2008)

Knowledge-based variable selection for learning rules from proteomic data. - Jonathan L. Lustgarten; Shyam Visweswaran; Robert P. Bowser; William R. Hogan; Vanathi Gopalakrishnan (BMC Bioinform., 2009)

Measuring the effect of commuting on the performance of the Bayesian Aerosol Release Detector. - Aurel Cami; Garrick L. Wallstrom; William R. Hogan (BMC Medical Informatics Decis. Mak., 2009)

Mining aggregates of over-the-counter products for syndromic surveillance. - Aurel Cami; Garrick L. Wallstrom; Ashley L. Fowlkes; Cathy A. Panozzo; William R. Hogan (Pattern Recognit. Lett., 2009)

Representing the Reality Underlying Demographic Data. - William R. Hogan; Swetha Garimalla; Shariq A. Tariq (ICBO, 2011)

Representing Local Identifiers in a Referent-Tracking System. - William R. Hogan; Swetha Garimalla; Shariq A. Tariq; Werner Ceusters (ICBO, 2011)

Towards an ontological theory of substance intolerance and hypersensitivity. - William R. Hogan (J. Biomed. Informatics, 2011)

Natural Language Processing methods and systems for biomedical ontology learning. - Kaihong Liu; William R. Hogan; Rebecca S. Crowley (J. Biomed. Informatics, 2011)

Simplifying MIREOT; a MIREOT Protege Plugin. - Josh Hanna; Chen Cheng; Alex Crow; Roger A. Hall; Jie Liu; Tejaswini Pendurthi; Trent Schmidt; Steven F. Jennings; Mathias Brochhausen; William R. Hogan (ISWC (Posters & Demos), 2012)

Apollo: Giving application developers a single point of access to public health models using structured vocabularies and Web services. - Michael M. Wagner 001; John D. Levander; Shawn T. Brown; William R. Hogan; Nicholas Millett; Josh Hanna (AMIA, 2013)

Understanding biomedicai research collaborations through social network analysis: A case study. - Jiang Bian 001; Mengjun Xie; Umit Topaloglu; Teresa Hudson; William R. Hogan (BIBM, 2013)

A Demonstration of Entity Identity Information Management Applied to Demographic Data in a Referent Tracking System. - Cheng Chen 001; Josh Hanna; John R. Talburt; Mathias Brochhausen; William R. Hogan (ICBO, 2013)

Maintaining the Drug Ontology: an Open-source, Structured Product Label API for the JVM. - Roger A. Hall; Josh Hanna; William R. Hogan (VDOS+DO@ICBO, 2013)

Towards a Consistent and Scientifically Accurate Drug Ontology. - William R. Hogan; Josh Hanna; Eric Joseph; Mathias Brochhausen (ICBO, 2013)

The Core Clinical Protocol Ontology (C2PO): A Realist Ontology for Representing the Recommendations within Clinical Guidelines. - Laura Slaughter; Mathias Brochhausen; William R. Hogan; Øystein Nytrø (MedInfo, 2013)

Developing a semantically rich ontology for the biobank-administration domain. - Mathias Brochhausen; Martin N. Fransson; Nitin Kanaskar; Mikael Eriksson; Roxana Merino-Martinez; Roger A. Hall; Loreana Norlin; Sanela Kjellqvist; Maria Hortlund; Umit Topaloglu; William R. Hogan; Jan-Eric Litton (J. Biomed. Semant., 2013)

Building a drug ontology based on RxNorm and other sources. - Josh Hanna; Eric Joseph; Mathias Brochhausen; William R. Hogan (J. Biomed. Semant., 2013)

Evidence of community structure in Biomedical Research Grant Collaborations. - Radhakrishnan Nagarajan; Alex T. Kalinka; William R. Hogan (J. Biomed. Informatics, 2013)

A Novel Representation of Terms Related to Infectious Disease Epidemiology for Epidemic Modeling: The Apollo Structured Vocabulary and Pre-existing Representations. - Mathias Brochhausen; William R. Hogan; John D. Levander; Shawn T. Brown; Nicholas Millett; Josh Hanna; Michael M. Wagner 001 (ICBO, 2014)

Social network analysis of biomedical research collaboration networks in a CTSA institution. - Jiang Bian 001; Mengjun Xie; Umit Topaloglu; Teresa Hudson; Hari Eswaran; William R. Hogan (J. Biomed. Informatics, 2014)

Mining Twitter as a First Step toward Assessing the Adequacy of Gender Identification Terms on Intake Forms. - Amanda Hicks; William R. Hogan; Michael W. Rutherford; Bradley A. Malin; Mengjun Xie; Christiane Fellbaum; Zhijun Yin; Daniel Fabbri; Josh Hanna; Jiang Bian 001 (AMIA, 2015)

An ontological analysis of diagnostic assertions in electronic healthcare records. - Werner Ceusters; William R. Hogan (ICBO, 2015)

Formalizing Knowledge and Evidence about Potential Drug-drug Interactions. - Jodi Schneider; Mathias Brochhausen; Samuel Rosko; Paolo Ciccarese; William R. Hogan; Daniel C. Malone; Yifan Ning; Tim Clark; Richard D. Boyce (BDM2I@ISWC, 2015)

Assessing the comorbidity gap between clinical studies and prevalence in elderly patient populations. - Zhe He 001; Neil Charness; Jiang Bian 001; William R. Hogan (BHI, 2016)

Towards an obesity-cancer knowledge base: Biomedical entity identification and relation detection. - Juan Antonio Lossio-Ventura; William R. Hogan; François Modave; Amanda Hicks; Josh Hanna; Yi Guo 005; Zhe He 001; Jiang Bian 001 (BIBM, 2016)

Examining Healthcare Utilization Patterns of Elderly and Middle-Aged Adults in the United States. - Cilia E. Zayas; Zhe He 001; Jiawei Yuan; Mildred Maldonado-Molina; William R. Hogan; François Modave; Yi Guo 005; Jiang Bian 001 (FLAIRS, 2016)

A Semantic Web Representation of Entire Populations. - Daniel Welch 003; Amanda Hicks; Josh Hanna; William R. Hogan (ICBO/BioCreative, 2016)

Adding Evidence Type Representation to DIDEO. - Mathias Brochhausen; Philip E. Empey; Jodi Schneider; William R. Hogan; Richard D. Boyce (ICBO/BioCreative, 2016)

An accurate and precise representation of drug ingredients. - Josh Hanna; Jiang Bian 001; William R. Hogan (J. Biomed. Semant., 2016)

The ontology of medically related social entities: recent developments. - Amanda Hicks; Josh Hanna; Daniel Welch 003; Mathias Brochhausen; William R. Hogan (J. Biomed. Semant., 2016)

Diagnosis, misdiagnosis, lucky guess, hearsay, and more: an ontological analysis. - William R. Hogan; Werner Ceusters (J. Biomed. Semant., 2016)

The Apollo Structured Vocabulary: an OWL2 ontology of phenomena in infectious disease epidemiology and population biology for use in epidemic simulation. - William R. Hogan; Michael M. Wagner 001; Mathias Brochhausen; John D. Levander; Shawn T. Brown; Nicholas Millett; Jay DePasse; Josh Hanna (J. Biomed. Semant., 2016)

Comparing and Contrasting A Priori and A Posteriori Generalizability Assessment of Clinical Trials on Type 2 Diabetes Mellitus. - Zhe He 001; Arturo Gonzalez-Izquierdo; Spiros C. Denaxas; Andrei Sura; Yi Guo 005; William R. Hogan; Elizabeth Shenkman; Jiang Bian 001 (AMIA, 2017)

Implementing a Hash-based Privacy-Preserving Entity Resolution Tool in the OneFlorida Clinical Data Research Network. - Jiang Bian 001; Andrei Sura; Gloria P. Lipori; Yi Guo 005; François Modave; Zhe He 001; Elizabeth Shenkman; William R. Hogan (AMIA, 2017)

Building an Obesity and Cancer Semantic Web Knowledge Base. - Juan Antonio Lossio-Ventura; William R. Hogan; François Modave; Amanda Hicks; Yi Guo 005; Zhe He 001; Mirela Vasconcelos; Jiang Bian 001 (AMIA, 2017)

OC-2-KB: A software pipeline to build an evidence-based obesity and cancer knowledge base. - Juan Antonio Lossio-Ventura; William R. Hogan; François Modave; Yi Guo 005; Zhe He 001; Amanda Hicks; Jiang Bian 001 (BIBM, 2017)

Ontology of Cancer Related Social-Ecological Variables. - Dharani K. Balasubramanian; Jamillah Z. Khan; Jiang Bian 001; Yi Guo 005; William R. Hogan; Amanda Hicks (ICBO, 2017)

That Which we Call a Pediatrician Would by Any Other Name a Child Treat (or not). - Amanda Hicks; William R. Hogan (ICBO, 2017)

The Building Blocks of Inter-operability. - Adam Culbertson; Satyender Goel; Margaret B. Madden; Niloufar Safaeinili; Kathryn L. Jackson; Thomas Carton; Russ Waitman; Mei Liu; Ashok Krishnamurthy; Lauren Hall; Nickie Cappella; Shyam Visweswaran; et al. (Appl. Clin. Inform., 2017)

Therapeutic indications and other use-case-driven updates in the drug ontology: anti-malarials, anti-hypertensives, opioid analgesics, and a large term request. - William R. Hogan; Josh Hanna; Amanda Hicks; Samira Amirova; Baxter Bramblett; Matthew Diller; Rodel Enderez; Timothy Modzelewski; Mirela Vasconcelos; Chris Delcher (J. Biomed. Semant., 2017)

Towards a privacy preserving cohort discovery framework for clinical research networks. - Jiawei Yuan; Bradley A. Malin; François Modave; Yi Guo 005; William R. Hogan; Elizabeth Shenkman; Jiang Bian 001 (J. Biomed. Informatics, 2017)

Combine Factual Medical Knowledge and Distributed Word Representation to Improve Clinical Named Entity Recognition. - Yonghui Wu; Xi Yang 015; Jiang Bian 001; Yi Guo 005; Hua Xu 001; William R. Hogan (AMIA, 2018)

Computable Eligibility Criteria through Ontology-driven Data Access: A Case Study of Hepatitis C Virus Trials. - Hansi Zhang; Zhe He 001; Xing He 003; Yi Guo 005; David R. Nelson; François Modave; Yonghui Wu; William R. Hogan; Mattia Prosperi; Jiang Bian 001 (AMIA, 2018)

Introducing Hypertension FACT: Vital Sign Ontology Annotations in the Florida Annotated Corpus for Translational Science. - Amanda Hicks; William R. Hogan; Carl Pepine; Nathan Boire; Chloe Herring; Selja Seppälä (FLAIRS, 2018)

OC-2-KB: integrating crowdsourcing into an obesity and cancer knowledge base curation system. - Juan Antonio Lossio-Ventura; William R. Hogan; François Modave; Yi Guo 005; Zhe He 001; Xi Yang 015; Hansi Zhang; Jiang Bian 001 (BMC Medical Informatics Decis. Mak., 2018)

Assessing the Validity of a a priori Patient-Trial Generalizability Score using Real-world Data from a Large Clinical Data Research Network: A Colorectal Cancer Clinical Trial Case Study. - Qian Li 034; Zhe He 001; Yi Guo 005; Hansi Zhang; Thomas J. George; William R. Hogan; Neil Charness; Jiang Bian 001 (AMIA, 2019)

Identifying Cancer Patients at Risk for Heart Failure Using Machine Learning Methods. - Xi Yang 015; Yan Gong; Nida Waheed; Keith March; Jiang Bian 001; William R. Hogan; Yonghui Wu (AMIA, 2019)

A Study of Deep Learning Methods for De-identification of Clinical Notes at Cross Institute Settings. - Xi Yang 015; Tianchen Lyu; Chih-Yin Lee; Jiang Bian 001; William R. Hogan; Yonghui Wu (ICHI, 2019)

Enhancing the drug ontology with semantically-rich representations of National Drug Codes and RxNorm unique concept identifiers. - Jonathan P. Bona; Mathias Brochhausen; William R. Hogan (BMC Bioinform., 2019)

A study of deep learning methods for de-identification of clinical notes in cross-institute settings. - Xi Yang 015; Tianchen Lyu; Qian Li 034; Chih-Yin Lee; Jiang Bian 001; William R. Hogan; Yonghui Wu (BMC Medical Informatics Decis. Mak., 2019)

Developing and Validating a Computable Phenotype for the Identification of Transgender and Gender Nonconforming Individuals and Subgroups. - Yi Guo 005; Xing He 003; Tianchen Lyu; Hansi Zhang; Yonghui Wu; Xi Yang 015; Zhaoyi Chen; Merry J. Markham; François Modave; Mengjun Xie; William R. Hogan; Christopher A. Harle; et al. (AMIA, 2020)

Predicting in-hospital mortality of patients with febrile neutropenia using machine learning models. - Xinsong Du; Jae Min; Chintan P. Shah; Rohit Bishnoi; William R. Hogan; Dominick J. Lemas (Int. J. Medical Informatics, 2020)

Assessing the practice of data quality evaluation in a national clinical data research network through a systematic scoping review in the era of real-world data. - Jiang Bian 001; Tianchen Lyu; Alexander T. Loiacono; Tonatiuh Mendoza Viramontes; Gloria P. Lipori; Yi Guo 005; Yonghui Wu; Mattia Prosperi; Thomas J. George; Christopher A. Harle; Elizabeth A. Shenkman; William R. Hogan (J. Am. Medical Informatics Assoc., 2020)

Identifying relations of medications with adverse drug events using recurrent convolutional neural networks and gradient boosting. - Xi Yang 015; Jiang Bian 001; Ruogu Fang; Ragnhildur I. Bjarnadottir; William R. Hogan; Yonghui Wu (J. Am. Medical Informatics Assoc., 2020)

Clinical concept extraction using transformers. - Xi Yang 015; Jiang Bian 001; William R. Hogan; Yonghui Wu (J. Am. Medical Informatics Assoc., 2020)

A realism-based approach to an ontological representation of symbiotic interactions. - Matthew Diller; Evan Johnson 002; Amanda Hicks; William R. Hogan (BMC Medical Informatics Decis. Mak., 2020)

A Study of Social and Behavioral Determinants of Health in Lung Cancer Patients Using Transformers-based Natural Language Processing Models. - Zehao Yu 001; Xi Yang 015; Chong Dang; Songzi Wu; Prakash Adekkanattu; Jyotishman Pathak; Thomas J. George; William R. Hogan; Yi Guo 005; Jiang Bian 001; Yonghui Wu (AMIA, 2021)

Developing an Ontology for Social and Behavioral Determinants of Health. - Hansi Zhang; Xi Yang 015; Thomas J. George; William R. Hogan; Jiang Bian 001; Yonghui Wu (AMIA, 2021)

Applications of artificial intelligence in drug development using real-world data. - Zhaoyi Chen; Xiong Liu; William R. Hogan; Elizabeth Shenkman; Jiang Bian 001 (CoRR, 2021)

Extracting social determinants of health from electronic health records using natural language processing: a systematic review. - Braja Gopal Patra; Mohit Manoj Sharma; Veer Vekaria; Prakash Adekkanattu; Olga V. Patterson; Benjamin S. Glicksberg; Lauren A. Lepow; Euijung Ryu; Joanna M. Biernacka; Al'ona Furmanchuk; Thomas J. George; William R. Hogan; et al. (J. Am. Medical Informatics Assoc., 2021)

Exploring the feasibility of using real-world data from a large clinical data research network to simulate clinical trials of Alzheimer's disease. - Zhaoyi Chen; Hansi Zhang; Yi Guo 005; Thomas J. George; Mattia Prosperi; William R. Hogan; Zhe He 001; Elizabeth A. Shenkman; Fei Wang 001; Jiang Bian 001 (npj Digit. Medicine, 2021)

Impacts of Eligibility Criteria on Trial Participants' Age in Alzheimer's Disease Clinical Trials. - Aokun Chen; Qian Li 034; Xing He 003; Michael Jaffee; William R. Hogan; Fei Wang 001; Yi Guo 005; Jiang Bian 001 (AMIA, 2022)

An Ontological Representation of Money with a View Toward Economic Determinants of Health. - Matthew Diller; William R. Hogan (ICBO, 2022)

Using Ontologies to Enhance Data on Intimate Partner Violence. - S. Clint Dowland; William R. Hogan (ICBO, 2022)

Identify Cancer Patients at Risk for Heart Failure using Electronic Health Record and Genetic Data. - Zehao Yu 001; Xi Yang 015; Yiqing Chen; Ruogu Fang; William R. Hogan; Yan Gong; Yonghui Wu (ICHI, 2022)

Integration of Biobanking Architecture with Genomics Data: Genomics Integrated Biobanking Ontology (GIBO). - Nitya Singh; Naomi Braun; William R. Hogan; Mathias Brochhausen (ICIMTH, 2022)

Ontology Development Kit: a toolkit for building, maintaining and standardizing biomedical ontologies. - Nicolas Matentzoglu; Damien Goutte-Gattat; Shawn Zheng Kai Tan; James P. Balhoff; Seth Carbon; Anita R. Caron; William D. Duncan; Joe E. Flack; Melissa A. Haendel; Nomi L. Harris; William R. Hogan; Charles Tapley Hoyt; et al. (Database J. Biol. Databases Curation, 2022)

GatorTron: A Large Clinical Language Model to Unlock Patient Information from Unstructured Electronic Health Records. - Xi Yang 015; Nima M. Pournejatian; Hoo Chang Shin; Kaleb E. Smith; Christopher Parisien; Colin Compas; Cheryl Martin 002; Mona G. Flores; Ying Zhang; Tanja Magoc; Christopher A. Harle; Gloria P. Lipori; et al. (CoRR, 2022)

Ontology Development Kit: a toolkit for building, maintaining, and standardising biomedical ontologies. - Nicolas Matentzoglu; Damien Goutte-Gattat; Shawn Zheng Kai Tan; James P. Balhoff; Seth Carbon; Anita R. Caron; William D. Duncan; Joe E. Flack; Melissa A. Haendel; Nomi L. Harris; William R. Hogan; Charles Tapley Hoyt; et al. (CoRR, 2022)

SODA: A Natural Language Processing Package to Extract Social Determinants of Health for Cancer Studies. - Zehao Yu 001; Xi Yang 015; Chong Dang; Prakash Adekkanattu; Braja Gopal Patra; Yifan Peng 002; Jyotishman Pathak; Debbie L. Wilson; Ching-Yuan Chang; Wei-Hsuan Lo-Ciganic; Thomas J. George; William R. Hogan; et al. (CoRR, 2022)

Phenotype clustering in health care: A narrative review for clinicians. - Tyler J. Loftus; Benjamin Shickel; Jeremy A. Balch; Patrick James Tighe; Kenneth L. Abbott; Brian Fazzone; Erik M. Anderson; Jared Rozowsky; Tezcan Ozrazgat-Baslanti; Yuanfang Ren; Scott A. Berceli; William R. Hogan; et al. (Frontiers Artif. Intell., 2022)

A scoping review of semantic integration of health data and information. - Hansi Zhang; Tianchen Lyu; Pengfei Yin; Sarah Bost; Xing He 003; Yi Guo 005; Mattia Prosperi; William R. Hogan; Jiang Bian 001 (Int. J. Medical Informatics, 2022)

The OneFlorida Data Trust: a centralized, translational research data infrastructure of statewide scope. - William R. Hogan; Elizabeth A. Shenkman; Temple Robinson; Olveen Carasquillo; Patricia S. Robinson; Rebecca Z. Essner; Jiang Bian 001; Gigi Lipori; Christopher A. Harle; Tanja Magoc; Lizabeth Manini; Tona Mendoza; et al. (J. Am. Medical Informatics Assoc., 2022)

A large language model for electronic health records. - Xi Yang 015; Aokun Chen; Nima M. Pournejatian; Hoo Chang Shin; Kaleb E. Smith; Christopher Parisien; Colin Compas; Cheryl Martin 002; Anthony B. Costa; Mona G. Flores; Ying Zhang; Tanja Magoc; et al. (npj Digit. Medicine, 2022)

The Occupation Ontology (OccO): Building a Bridge between Global Occupational Standards. - John Beverley; Sam Smith; Matthew Diller; William D. Duncan; Jie Zheng 001; John W. Judkins; William R. Hogan; Robin McGill; Damion M. Dooley; Yongqun He (JOWO, 2023)

Ontology of language, with applications to demographic data. - S. Clint Dowland; Barry Smith 001; Matthew Diller; Jobst Landgrebe; William R. Hogan (Appl. Ontology, 2023)

Creating a Discipline-specific Commons for Infectious Disease Epidemiology. - Michael M. Wagner 001; William R. Hogan; John D. Levander; Adam Darr; Matt Diller; Max Sibilla; Alexander T. Loiacono; Terence Sperringer Jr.; Shawn T. Brown (CoRR, 2023)

A study of generative large language model for medical research and healthcare. - Cheng Peng 009; Xi Yang 015; Aokun Chen; Kaleb E. Smith; Nima M. Pournejatian; Anthony B. Costa; Cheryl Martin 002; Mona G. Flores; Ying Zhang; Tanja Magoc; Gloria P. Lipori; Duane A. Mitchell; et al. (npj Digit. Medicine, 2023)

Clinical concept and relation extraction using prompt-based machine reading comprehension. - Cheng Peng 009; Xi Yang 015; Zehao Yu 001; Jiang Bian 001; William R. Hogan; Yonghui Wu (J. Am. Medical Informatics Assoc., 2023)

The role of health system penetration rate in estimating the prevalence of type 1 diabetes in children and adolescents using electronic health records. - Piaopiao Li; Tianchen Lyu; Khalid Alkhuzam; Eliot Spector; William T. Donahoo; Sarah Bost; Yonghui Wu; William R. Hogan; Mattia Prosperi; Desmond A. Schatz; Mark A Atkinson; Michael J. Haller; et al. (J. Am. Medical Informatics Assoc., 2023)

Credentials in the Occupation Ontology. - John Beverley; Robin McGill; Sam Smith; Jie Zheng 001; Giacomo De Colle; Finn Wilson; Matthew Diller; William D. Duncan; William R. Hogan; Yongqun He (ICBO, 2024)

Expanding the Ontology of Organizational Structures of Trauma Centers and Trauma Systems. - Diya Mehta; Justin M. Whorton; Reza Shahriari; Eric D. Ragan; Jonathan P. Bona; William R. Hogan; Kevin W. Sexton; Mathias Brochhausen (ICBO, 2024)

Exploring the Relation between Contextual Social Determinants of Health and COVID-19 Occurrence and Hospitalization. - Aokun Chen; Yunpeng Zhao; Yi Zheng; Hui Hu; Xia Hu 001; Jennifer N. Fishe; William R. Hogan; Elizabeth A. Shenkman; Yi Guo 005; Jiang Bian 001 (Informatics, 2024)

Towards Machine-FAIR: Representing software and datasets to facilitate reuse and scientific discovery by machines. - Michael M. Wagner 001; William R. Hogan; John D. Levander; Matthew Diller (J. Biomed. Informatics, 2024)

Identifying social determinants of health from clinical narratives: A study of performance, documentation ratio, and potential bias. - Zehao Yu 001; Cheng Peng 009; Xi Yang 015; Chong Dang; Prakash Adekkanattu; Braja Gopal Patra; Yifan Peng 002; Jyotishman Pathak; Debbie L. Wilson; Ching-Yuan Chang; Wei-Hsuan Lo-Ciganic; Thomas J. George; et al. (J. Biomed. Informatics, 2024)

Concretizing plan specifications as realizables within the OBO foundry. - William D. Duncan; Matthew Diller; Damion M. Dooley; William R. Hogan; John Beverley (J. Biomed. Semant., 2024)