Identification of H-NMR Spectra of Xyloglucan Oligosaccharides: A Comparative Study of Artificial Neural Networks and Bayesian Classification Using Nonparametric Density Estimation. - Faramarz Valafar; Homayoun Valafar; William S. York (IC-AI, 1999)

Modular Ontology Design Using Canonical Building Blocks in the Biochemistry Domain. - Christopher J. Thomas; Amit P. Sheth; William S. York (FOIS, 2006)

Knowledge modeling and its application in life sciences: a tale of two ontologies. - Satya Sanket Sahoo; Christopher Thomas 001; Amit P. Sheth; William S. York; Samir Tartir (WWW, 2006)

GlycoBrowser: A Tool for Contextual Visualization of Biological Data and Pathways Using Ontologies. - Matthew Eavenson; Maciej Janik; Shravya Nimmagadda; John A. Miller 001; Krys J. Kochut; William S. York (ISBRA, 2008)

GlycoVault: A Bioinformatics Infrastructure for Glycan Pathway Visualization, Analysis and Modeling. - Shravya Nimmagadda; Amrita Basu; Matthew Eavenson; Jun Han 007; Maciej Janik; Rajesh Narra; Kishore Nimmagadda; Arpan Sharma; Krys J. Kochut; John A. Miller 001; William S. York (ITNG, 2008)

Supporting Interoperability using the Discrete-event Modeling Ontology (DeMO). - Gregory A. Silver; Kushel Rai Bellipady; John A. Miller 001; William S. York; Krys J. Kochut (WSC, 2009)

The DBCLS BioHackathon: standardization and interoperability for bioinformatics web services and workflows. - Toshiaki Katayama; Kazuharu Arakawa; Mitsuteru Nakao; Keiichiro Ono; Kiyoko F. Aoki-Kinoshita; Yasunori Yamamoto; Atsuko Yamaguchi; Shuichi Kawashima; Hong-Woo Chun; Jan Aerts; Bruno Aranda; Lord H. Barboza; et al. (J. Biomed. Semant., 2010)

DeMO: An Ontology for Discrete-event Modeling and Simulation. - Gregory A. Silver; John A. Miller 001; Maria Hybinette; Gregory T. Baramidze; William S. York (Simul., 2011)

PGMHD: A scalable probabilistic graphical model for massive hierarchical data problems. - Khalifeh AlJadda; Mohammed Korayem; Camilo Ortiz; Trey Grainger; John A. Miller 001; William S. York (IEEE BigData, 2014)

Toolboxes for a standardised and systematic study of glycans. - Matthew P. Campbell; René Ranzinger; Thomas Lütteke; Julien Mariethoz; Catherine A. Hayes; Jingyu Zhang; Yukie Akune; Kiyoko F. Aoki-Kinoshita; David Damerell; Giorgio Carta; William S. York; Stuart M. Haslam; et al. (BMC Bioinform., 2014)

EUROCarbDB(CCRC): a EUROCarbDB node for storing glycomics standard data. - Khalifeh AlJadda; Melody P. Porterfield; Robert Bridger; Christian Heiss; Michael Tiemeyer; Lance Wells; John A. Miller 001; William S. York; René Ranzinger (Bioinform., 2015)

Mining Massive Hierarchical Data Using a Scalable Probabilistic Graphical Model. - Khalifeh AlJadda; Mohammed Korayem; Camilo Ortiz; Trey Grainger; John A. Miller 001; Khaled Rasheed; Krys J. Kochut; William S. York; René Ranzinger; Melody P. Porterfield (CoRR, 2015)

GELATO and SAGE: An Integrated Framework for MS Annotation. - Khalifeh AlJadda; René Ranzinger; Melody P. Porterfield; Brent Weatherly; Mohammed Korayem; John A. Miller 001; Khaled Rasheed; Krys J. Kochut; William S. York (CoRR, 2015)

GlyTouCan 1.0 - The international glycan structure repository. - Kiyoko F. Aoki-Kinoshita; Sanjay Agravat; Nobuyuki P. Aoki; Sena Arpinar; Richard D. Cummings; Akihiro Fujita; Noriaki Fujita; Gerald M. Hart; Stuart M. Haslam; Toshisuke Kawasaki; Masaaki Matsubara; Kelley W. Moreman; et al. (Nucleic Acids Res., 2016)

Mining massive hierarchical data using a scalable probabilistic graphical model. - Khalifeh AlJadda; Mohammed Korayem; Camilo Ortiz; Trey Grainger; John A. Miller 001; Khaled Rasheed; Krys J. Kochut; Hao Peng 007; William S. York; René Ranzinger; Melody P. Porterfield (Inf. Sci., 2018)

GlyGen data model and processing workflow. - Robel Y. Kahsay; Jeet Vora; Rahi Navelkar; Reza Mousavi; Brian C. Fochtman; Xavier Holmes; Nagarajan Pattabiraman; René Ranzinger; Rupali Mahadik; Tatiana Williamson; Sujeet Kulkarni; Gaurav Agarwal; et al. (Bioinform., 2020)

Identification of 1H-NMR Spectra of Xyloglucan Oligosaccharides: A Comparative Study of Artificial Neural Networks and Bayesian Classification Using Nonparametric Density Estimation. - Faramarz Valafar; Homayoun Valafar; William S. York (CoRR, 2020)