The NLM Indexing Initiative's Medical Text Indexer. - Alan R. Aronson; James G. Mork; Clifford W. Gay; Susanne M. Humphrey; Willie J. Rogers (MedInfo, 2004)

Journal Descriptor Indexing Tool for Categorizing Text According to Discipline or Semantic Type. - Susanne M. Humphrey; Chris J. Lu; Willie J. Rogers; Allen C. Browne (AMIA, 2006)

Word sense disambiguation by selecting the best semantic type based on Journal Descriptor Indexing: Preliminary experiment. - Susanne M. Humphrey; Willie J. Rogers; Halil Kilicoglu; Dina Demner-Fushman; Thomas C. Rindflesch (J. Assoc. Inf. Sci. Technol., 2006)

From indexing the biomedical literature to coding clinical text: experience with MTI and machine learning approaches. - Alan R. Aronson; Olivier Bodenreider; Dina Demner-Fushman; Kin Wah Fung; Vivian K. Lee; James G. Mork; Aurélie Névéol; Lee B. Peters; Willie J. Rogers (BioNLP@ACL, 2007)

CTB: A Custom Taxonomy Builder for Named Entity Extraction. - Dina Demner-Fushman; Willie J. Rogers (AMIA, 2017)

MetaMap Lite: an evaluation of a new Java implementation of MetaMap. - Dina Demner-Fushman; Willie J. Rogers; Alan R. Aronson (J. Am. Medical Informatics Assoc., 2017)

Finding medication doses in the literature. - Dina Demner-Fushman; James G. Mork; Willie J. Rogers; Sonya E. Shooshan; Laritza M. Rodriguez; Alan R. Aronson (AMIA, 2018)

Automatic recognition of figurative language in biomedical articles. - Dina Demner-Fushman; Willie J. Rogers; James G. Mork (SDU@AAAI, 2021)