Biological Evaluation of d2, an Algorithm for High-Performance Sequence Comparison. - Winston Hide; John Burke; Daniel B. da Vison (J. Comput. Biol., 1994)

ExScript: An 'EX'-Centric Approach to the Description of Transcript Diversity. - Win Hide (Bioinform., 2001)

STACK: Sequence Tag Alignment and Consensus Knowledgebase. - Alan Christoffels; Antoine van Gelder; Gary Greyling; Robert Miller; Tania Hide; Winston A. Hide (Nucleic Acids Res., 2001)

Assessment of the parallelization approach of d2_cluster for high-performance sequence clustering. - John E. Carpenter; Alan Christoffels; Yael Weinbach; Winston A. Hide (J. Comput. Chem., 2002)

FRAGS: estimation of coding sequence substitution rates from fragmentary data. - Estienne C. Swart; Winston A. Hide; Cathal Seoighe (BMC Bioinform., 2004)

CLU: A new algorithm for EST clustering. - Andrey A. Ptitsyn; Winston Hide (BMC Bioinform., 2005)

The Human Anatomic Gene Expression Library (H-ANGEL), the H-Inv integrative display of human gene expression across disparate technologies and platforms. - Motohiko Tanino; Marie-Anne Debily; Takuro Tamura; Teruyoshi Hishiki; Osamu Ogasawara; Katsuji Murakawa; Shoko Kawamoto; Kouichi Itoh; Shinya Watanabe; Sandro José de Souza; Sandrine Imbeaud; Esther Graudens; et al. (Nucleic Acids Res., 2005)

The LIFEdb database in 2006. - Alexander Mehrle; Heiko Rosenfelder; Ingo Schupp; Coral del Val; Dorit Arlt; Florian Hahne; Stephanie Bechtel; Jeremy C. Simpson; Oliver Hofmann 001; Winston Hide; Karl-Heinz Glatting; Wolfgang Huber; et al. (Nucleic Acids Res., 2006)

An overview of the wcd EST clustering tool. - Scott Hazelhurst; Winston Hide; Zsuzsanna Lipták; Ramon Nogueira; Richard Starfield (Bioinform., 2008)

ISA software suite: supporting standards-compliant experimental annotation and enabling curation at the community level. - Philippe Rocca-Serra; Marco Brandizi; Eamonn Maguire; Nataliya Sklyar; Chris F. Taylor; Kimberly Begley; Dawn Field; Stephen C. Harris; Winston Hide; Oliver Hofmann 001; Steffen Neumann; Peter Sterk; et al. (Bioinform., 2010)

Ten Simple Rules for Organizing a Virtual Conference - Anywhere. - Nelson N. Gichora; Segun A. Fatumo; Mtakai V. Ngara; Noura Chelbat; Kavisha Ramdayal; Kenneth B. Opap; Geoffrey H. Siwo; Marion O. Adebiyi; Amina El Gonnouni; Denis Zofou; Amal A. M. Maurady; Ezekiel F. Adebiyi; et al. (PLoS Comput. Biol., 2010)

The Stem Cell Discovery Engine: an integrated repository and analysis system for cancer stem cell comparisons. - Shannan J. Ho Sui; Kimberly Begley; Dorothy Reilly; Brad Chapman; Ray McGovern; Philippe Rocca-Serra; Eamonn Maguire; Gabriel M. Altschuler; Terah A. A. Hansen; Ramakrishna Sompallae; Andrei Krivtsov; Ramesh A. Shivdasani; et al. (Nucleic Acids Res., 2012)

Novel Developmental Analyses Identify Longitudinal Patterns of Early Gut Microbiota that Affect Infant Growth. - Richard A. White; Jørgen V. Bjørnholt; Donna D. Baird; Tore Midtvedt; Jennifer R. Harris; Marcello Pagano; Winston Hide; Knut Rudi; Birgitte Moen; Nina Iszatt; Shyamal D. Peddada; Merete Eggesbø (PLoS Comput. Biol., 2013)

CAGExploreR: an R package for the analysis and visualization of promoter dynamics across multiple experiments. - Emmanuel Dimont; Oliver Hofmann 001; Shannan J. Ho Sui; Alistair R. R. Forrest; Hideya Kawaji; Winston Hide (Bioinform., 2014)

A promoter-level mammalian expression atlas. - Fantom Consortium; RIKEN PMII; RIKEN CLST (DGT); Alistair R. R. Forrest; Hideya Kawaji; Michael Rehli; J. Kenneth Baillie; Michiel J. L. de Hoon; Vanja Haberle; Timo Lassmann; Ivan V. Kulakovskiy; Marina Lizio; et al. (Nat., 2014)

edgeRun: an R package for sensitive, functionally relevant differential expression discovery using an unconditional exact test. - Emmanuel Dimont; Jiantao Shi; Rory D. Kirchner; Winston Hide (Bioinform., 2015)

Message from the ISCB: ISCB Ebola award for important future research on the computational biology of Ebola virus. - Peter D. Karp; Bonnie Berger; Diane E. Kovats; Thomas Lengauer; Michal Linial; Pardis Sabeti; Winston Hide; Burkhard Rost (Bioinform., 2015)

ISCB Ebola Award for Important Future Research on the Computational Biology of Ebola Virus. - Peter D. Karp; Bonnie Berger; Diane E. Kovats; Thomas Lengauer; Michal Linial; Pardis Sabeti; Winston Hide; Burkhard Rost (PLoS Comput. Biol., 2015)

The Pathway Coexpression Network: Revealing pathway relationships. - Yered Pita-Juárez; Gabriel M. Altschuler; Sokratis Kariotis; Wenbin Wei 003; Katjusa Koler; Claire Green; Rudolph E. Tanzi; Winston Hide (PLoS Comput. Biol., 2018)

A comparison between similarity matrices for principal component analysis to assess population stratification in sequenced genetic data sets. - Sanghun Lee; Georg Hahn; Julian Hecker; Sharon Marie Lutz; Kristina Mullin; Winston Hide; Lars Bertram; Dawn L. DeMeo; Rudolph E. Tanzi; Christoph Lange 003; Dmitry Prokopenko (Briefings Bioinform., 2023)

PanomiR: a systems biology framework for analysis of multi-pathway targeting by miRNAs. - Pourya Naderi Yeganeh; Yue Y. Teo; Dimitra Karagkouni; Yered Pita-Juárez; Sarah L. Morgan; Frank J. Slack; Ioannis S. Vlachos; Winston A. Hide (Briefings Bioinform., 2023)

Prediction of disease-free survival for precision medicine using cooperative learning on multi-omic data. - Georg Hahn; Dmitry Prokopenko; Julian Hecker; Sharon Marie Lutz; Kristina Mullin; Leinal Sejour; Winston Hide; Ioannis S. Vlachos; Stacia Desantis; Rudolph E. Tanzi; Christoph Lange 003 (Briefings Bioinform., 2024)

Perceptual and technical barriers in sharing and formatting metadata accompanying omics studies. - Yu-Ning Huang; Michael I. Love; Cynthia Flaire Ronkowski; Dhrithi Deshpande; Lynn M. Schriml; Annie Wong-Beringer; Barend Mons; Russell Corbett-Detig; Christopher I Hunter; Jason H. Moore; Lana X. Garmire; T. B. K. Reddy; et al. (CoRR, 2024)