An improved compound Poisson model for the number of motif hits in DNA sequences. - Wolfgang Kopp; Martin Vingron (Bioinform., 2017)

DNA Motif Match Statistics Without Poisson Approximation. - Wolfgang Kopp; Martin Vingron (J. Comput. Biol., 2019)

Crowdsourcing digital health measures to predict Parkinson's disease severity: the Parkinson's Disease Digital Biomarker DREAM Challenge. - Solveig K. Sieberts; Jennifer Schaff; Marlena Duda; Bálint Á Pataki; Ming Sun; Phil Snyder; Jean-Francois Daneault; Federico Parisi; Gianluca Costante; Udi Rubin; Peter Banda; Yooree Chae; et al. (npj Digit. Medicine, 2021)

Simultaneous dimensionality reduction and integration for single-cell ATAC-seq data using deep learning. - Wolfgang Kopp; Altuna Akalin; Uwe Ohler (Nat. Mach. Intell., 2022)

scMaui: a widely applicable deep learning framework for single-cell multiomics integration in the presence of batch effects and missing data. - Yunhee Jeong; Jonathan Ronen; Wolfgang Kopp; Pavlo Lutsik; Altuna Akalin (BMC Bioinform., 2024)