Research Paper: Corpus-based Statistical Screening for Phrase Identification. - Won Kim 003; W. John Wilbur (J. Am. Medical Informatics Assoc., 2000)

Automatic MeSH term assignment and quality assessment. - Won Kim 003; Alan R. Aronson; W. John Wilbur (AMIA, 2001)

Amino Acid Residue Environments and Predictions of Residue Type. - Won Kim 003; W. John Wilbur (Comput. Chem., 2001)

Corpus-based statistical screening for content-bearing terms. - Won Kim 003; W. John Wilbur (J. Assoc. Inf. Sci. Technol., 2001)

DNA splice site detection: a comparison of specific and general methods. - Won Kim 003; W. John Wilbur (AMIA, 2002)

The Dimensions of Indexing. - W. John Wilbur; Won Kim 003 (AMIA, 2003)

Using MEDLINE as a Knowledge Source for Disambiguating Abbreviations in Full-Text Biomedical Journal Articles. - Hong Yu 001; Won Kim 003; Vasileios Hatzivassiloglou; W. John Wilbur (CBMS, 2004)

Knowledge-Intensive and Statistical Approaches to the Retrieval and Annotation of Genomics MEDLINE Citations. - Alan R. Aronson; Susanne M. Humphrey; Nicholas C. Ide; Won Kim 003; Russell F. Loane; James G. Mork; Lawrence H. Smith; Lorraine K. Tanabe; W. John Wilbur; Natalie Xie; Dina Demner-Fushman; Hongfang Liu (TREC, 2004)

A Strategy for Assigning New Concepts in the MEDLINE Database. - Won Kim 003; W. John Wilbur (AMIA, 2005)

The Synergy Between PAV and AdaBoost. - W. John Wilbur; Lana Yeganova; Won Kim 003 (Mach. Learn., 2005)

Spelling correction in the PubMed search engine. - W. John Wilbur; Won Kim 003; Natalie Xie (Inf. Retr., 2006)

A large scale, corpus-based approach for automatically disambiguating biomedical abbreviations. - Hong Yu 001; Won Kim 003; Vasileios Hatzivassiloglou; W. John Wilbur (ACM Trans. Inf. Syst., 2006)

Using MEDLINE as a knowledge source for disambiguating abbreviations and acronyms in full-text biomedical journal articles. - Hong Yu 001; Won Kim 003; Vasileios Hatzivassiloglou; W. John Wilbur (J. Biomed. Informatics, 2007)

Evaluating Relevance Ranking Strategies for MEDLINE Retrieval. - Zhiyong Lu; Won Kim 003; W. John Wilbur (AMIA, 2008)

Abbreviation definition identification based on automatic precision estimates. - Sunghwan Sohn; Donald C. Comeau; Won Kim 003; W. John Wilbur (BMC Bioinform., 2008)

Research Paper: Optimal Training Sets for Bayesian Prediction of MeSH® Assignment. - Sunghwan Sohn; Won Kim 003; Donald C. Comeau; W. John Wilbur (J. Am. Medical Informatics Assoc., 2008)

Exploring Two Biomedical Text Genres for Disease Recognition. - Aurélie Névéol; Won Kim 003; W. John Wilbur; Zhiyong Lu (BioNLP@HLT-NAACL, 2009)

Evaluation of query expansion using MeSH in PubMed. - Zhiyong Lu; Won Kim 003; W. John Wilbur (Inf. Retr., 2009)

The ineffectiveness of within-document term frequency in text classification. - W. John Wilbur; Won Kim 003 (Inf. Retr., 2009)

Viewpoint Paper: Evaluating Relevance Ranking Strategies for MEDLINE Retrieval. - Zhiyong Lu; Won Kim 003; W. John Wilbur (J. Am. Medical Informatics Assoc., 2009)

How to interpret PubMed queries and why it matters. - Lana Yeganova; Donald C. Comeau; Won Kim 003; W. John Wilbur (J. Assoc. Inf. Sci. Technol., 2009)

Text Mining Techniques for Leveraging Positively Labeled Data. - Lana Yeganova; Donald C. Comeau; Won Kim 003; W. John Wilbur (BioNLP@ACL, 2011)

Comparison of Two Methods for Finding Biomedical Categories in Medline. - Lana Yeganova; Won Kim 003; Donald C. Comeau; W. John Wilbur (ICMLA (2), 2011)

Improving a gold standard: treating human relevance judgments of MEDLINE document pairs. - W. John Wilbur; Won Kim 003 (BMC Bioinform., 2011)

PROBE: Periodic Random Orbiter Algorithm for Machine Learning. - Larry H. Smith; Won Kim 003; W. John Wilbur (AAAI Fall Symposium: Information Retrieval and Knowledge Discovery in Biomedical Text, 2012)

Automatic Identification of Key Concepts in Large PubMed Retrievals. - Lana Yeganova; Vahan Grigoryan; Won Kim 003; W. John Wilbur (AAAI Fall Symposium: Information Retrieval and Knowledge Discovery in Biomedical Text, 2012)

Classifying Gene Sentences in Biomedical Literature by Combining High-Precision Gene Identifiers. - Sun Kim; Won Kim 003; Donald C. Comeau; W. John Wilbur (BioNLP@HLT-NAACL, 2012)

Prioritizing PubMed articles for the Comparative Toxicogenomic Database utilizing semantic information. - Sun Kim; Won Kim 003; Chih-Hsuan Wei; Zhiyong Lu; W. John Wilbur (Database J. Biol. Databases Curation, 2012)

Finding biomedical categories in Medline®. - Lana Yeganova; Won Kim 003; Donald C. Comeau; W. John Wilbur (J. Biomed. Semant., 2012)

Identifying well-formed biomedical phrases in MEDLINE® text. - Won Kim 003; Lana Yeganova; Donald C. Comeau; W. John Wilbur (J. Biomed. Informatics, 2012)

Stochastic Gradient Descent and the Prediction of MeSH for PubMed Records. - W. John Wilbur; Won Kim 003 (AMIA, 2014)

Retro: concept-based clustering of biomedical topical sets. - Lana Yeganova; Won Kim 003; Sun Kim; W. John Wilbur (Bioinform., 2014)

Author name disambiguation for PubMed. - Wanli Liu; Rezarta Islamaj Dogan; Sun Kim; Donald C. Comeau; Won Kim 003; Lana Yeganova; Zhiyong Lu; W. John Wilbur (J. Assoc. Inf. Sci. Technol., 2014)

PubTermVariants: biomedical term variants and their use for PubMed search. - Lana Yeganova; Won Kim 003; Sun Kim; Rezarta Islamaj Dogan; Wanli Liu; Donald C. Comeau; Zhiyong Lu; W. John Wilbur (BioNLP@ACL, 2016)

MeSH-based dataset for measuring the relevance of text retrieval. - Won Kim 003; Lana Yeganova; Donald C. Comeau; W. John Wilbur; Zhiyong Lu (BioNLP, 2018)

SingleCite: Towards an improved Single Citation Search in PubMed. - Lana Yeganova; Donald C. Comeau; Won Kim 003; W. John Wilbur; Zhiyong Lu (BioNLP, 2018)

A Field Sensor: computing the composition and intent of PubMed queries. - Lana Yeganova; Won Kim 003; Donald C. Comeau; W. John Wilbur; Zhiyong Lu (Database J. Biol. Databases Curation, 2018)

PDC - a probabilistic distributional clustering algorithm: a case study on suicide articles in PubMed. - Rezarta Islamaj Dogan; Lana Yeganova; Won Kim 003; Natalie Xie; W. John Wilbur (CoRR, 2019)

Navigating the landscape of COVID-19 research through literature analysis: A bird's eye view. - Lana Yeganova; Rezarta Islamaj Dogan; Qingyu Chen 001; Robert Leaman; Alexis Allot; Chih-Hsuan Wei; Donald C. Comeau; Won Kim 003; Yifan Peng 002; W. John Wilbur; Zhiyong Lu (CoRR, 2020)

Improving PubMed Retrieval by Integrating Abstract and Full Text Search. - Lana Yeganova; Won Kim 003; Donald C. Comeau; W. John Wilbur; Zhiyong Lu (AMIA, 2021)

Measuring the relative importance of full text sections for information retrieval from scientific literature. - Lana Yeganova; Won Kim 003; Donald C. Comeau; W. John Wilbur; Zhiyong Lu (BioNLP@NAACL-HLT, 2021)

Towards a unified search: Improving PubMed retrieval with full text. - Won Kim 003; Lana Yeganova; Donald C. Comeau; W. John Wilbur; Zhiyong Lu (J. Biomed. Informatics, 2022)

BioCPT: Contrastive Pre-trained Transformers with Large-scale PubMed Search Logs for Zero-shot Biomedical Information Retrieval. - Qiao Jin 001; Won Kim 003; Qingyu Chen 001; Donald C. Comeau; Lana Yeganova; W. John Wilbur; Zhiyong Lu (CoRR, 2023)

MedCPT: Contrastive Pre-trained Transformers with large-scale PubMed search logs for zero-shot biomedical information retrieval. - Qiao Jin 001; Won Kim 003; Qingyu Chen 001; Donald C. Comeau; Lana Yeganova; W. John Wilbur; Zhiyong Lu (Bioinform., 2023)

Opportunities and challenges for ChatGPT and large language models in biomedicine and health. - Shubo Tian; Qiao Jin 001; Lana Yeganova; Po-Ting Lai; Qingqing Zhu; Xiuying Chen; Yifan Yang 006; Qingyu Chen 001; Won Kim 003; Donald C. Comeau; Rezarta Islamaj; Aadit Kapoor; et al. (Briefings Bioinform., 2024)