Pre-trained Language Model for Biomedical Question Answering. - Wonjin Yoon; Jinhyuk Lee; Donghyeon Kim; Minbyul Jeong; Jaewoo Kang (PKDD/ECML Workshops (2), 2019)

A Neural Named Entity Recognition and Multi-Type Normalization Tool for Biomedical Text Mining. - Donghyeon Kim; Jinhyuk Lee; Chan Ho So; Hwisang Jeon; Minbyul Jeong; Yonghwa Choi; Wonjin Yoon; Mujeen Sung; Jaewoo Kang (IEEE Access, 2019)

CollaboNet: collaboration of deep neural networks for biomedical named entity recognition. - Wonjin Yoon; Chan Ho So; Jinhyuk Lee; Jaewoo Kang (BMC Bioinform., 2019)

Transferability of Natural Language Inference to Biomedical Question Answering. - Minbyul Jeong; Mujeen Sung; Gangwoo Kim; Donghyeon Kim; Wonjin Yoon; Jaehyo Yoo; Jaewoo Kang (CLEF (Working Notes), 2020)

Answering Questions on COVID-19 in Real-Time. - Jinhyuk Lee; Sean S. Yi; Minbyul Jeong; Mujeen Sung; Wonjin Yoon; Yonghwa Choi; Miyoung Ko; Jaewoo Kang (NLP4COVID@EMNLP, 2020)

BioBERT: a pre-trained biomedical language representation model for biomedical text mining. - Jinhyuk Lee; Wonjin Yoon; Sungdong Kim; Donghyeon Kim; Sunkyu Kim; Chan Ho So; Jaewoo Kang (Bioinform., 2020)

Learning by Semantic Similarity Makes Abstractive Summarization Better. - Wonjin Yoon; Yoon Sun Yeo; Minbyul Jeong; Bong-Jun Yi; Jaewoo Kang (CoRR, 2020)

Can pandemics transform scientific novelty? Evidence from COVID-19. - Meijun Liu; Yi Bu 001; Chongyan Chen; Jian Xu 003; Daifeng Li; Yan Leng; Richard Barry Freeman; Eric Meyer; Wonjin Yoon; Mujeen Sung; Minbyul Jeong; Jinhyuk Lee; et al. (CoRR, 2020)

KU-DMIS at BioASQ 9: Data-centric and model-centric approaches for biomedical question answering. - Wonjin Yoon; Jaehyo Yoo; Sumin Seo; Mujeen Sung; Minbyul Jeong; Gangwoo Kim; Jaewoo Kang (CLEF (Working Notes), 2021)

Improving Tagging Consistency and Entity Coverage for Chemical Identification in Full-text Articles. - Hyunjae Kim; Mujeen Sung; Wonjin Yoon; Sungjoon Park; Jaewoo Kang (CoRR, 2021)

Data-Centric and Model-Centric Approaches for Biomedical Question Answering. - Wonjin Yoon; Jaehyo Yoo; Sumin Seo; Mujeen Sung; Minbyul Jeong; Gangwoo Kim; Jaewoo Kang (CLEF, 2022)

KU_ED at SocialDisNER: Extracting Disease Mentions in Tweets Written in Spanish. - Antoine Lain; Wonjin Yoon; Hyunjae Kim; Jaewoo Kang; Ian Simpson (SMM4H@COLING, 2022)

Biomedical NER for the Enterprise with Distillated BERN2 and the Kazu Framework. - Wonjin Yoon; Richard Jackson; Elliot Ford; Vladimir Poroshin; Jaewoo Kang (EMNLP (Industry Track), 2022)

Full-text chemical identification with improved generalizability and tagging consistency. - Hyunjae Kim; Mujeen Sung; Wonjin Yoon; Sungjoon Park; Jaewoo Kang (Database J. Biol. Databases Curation, 2022)

Sequence tagging for biomedical extractive question answering. - Wonjin Yoon; Richard Jackson; Aron Lagerberg; Jaewoo Kang (Bioinform., 2022)

Pandemics are catalysts of scientific novelty: Evidence from COVID-19. - Meijun Liu; Yi Bu 001; Chongyan Chen; Jian Xu 003; Daifeng Li; Yan Leng; Richard B. Freeman 002; Eric T. Meyer; Wonjin Yoon; Mujeen Sung; Minbyul Jeong; Jinhyuk Lee; et al. (J. Assoc. Inf. Sci. Technol., 2022)

Exploring Approaches to Answer Biomedical Questions: From Pre-processing to GPT-4. - Hyunjae Kim; Hyeon Hwang; Chaeeun Lee; Minju Seo; Wonjin Yoon; Jaewoo Kang (CLEF (Working Notes), 2023)

Biomedical relation extraction with knowledge base-refined weak supervision. - Wonjin Yoon; Sean S. Yi; Richard Jackson; Hyunjae Kim; Sunkyu Kim; Jaewoo Kang (Database J. Biol. Databases Curation, 2023)

Overview of the 2024 Shared Task on Chemotherapy Treatment Timeline Extraction. - Jiarui Yao; Harry Hochheiser; Wonjin Yoon; Eli Goldner; Guergana Savova (ClinicalNLP@NAACL, 2024)

LCD benchmark: long clinical document benchmark on mortality prediction for language models. - Wonjin Yoon; Shan Chen 004; Yanjun Gao; Zhanzhan Zhao; Dmitriy Dligach; Danielle S. Bitterman; Majid Afshar; Timothy A. Miller (J. Am. Medical Informatics Assoc., 2025)

Aspect-Oriented Summarization for Psychiatric Short-Term Readmission Prediction. - Wonjin Yoon; Boyu Ren; Spencer Thomas; Chanwhi Kim; Guergana Savova; Mei-Hua Hall; Timothy Miller 002 (CoRR, 2025)

Using tournaments to calculate AUROC for zero-shot classification with LLMs. - Wonjin Yoon; Ian Bulovic; Timothy A. Miller (CoRR, 2025)

Medical Hallucinations in Foundation Models and Their Impact on Healthcare. - Yubin Kim 002; Hyewon Jeong; Shan Chen 004; Shuyue Stella Li; Mingyu Lu; Kumail Alhamoud; Jimin Mun; Cristina Grau; Minseok Jung; Rodrigo Gameiro; Lizhou Fan; Eugene Park; et al. (CoRR, 2025)