DEGseq: an R package for identifying differentially expressed genes from RNA-seq data. - Likun Wang 003; Zhixing Feng; Xi Wang 002; Xiaowo Wang; Xuegong Zhang (Bioinform., 2010)

Using non-uniform read distribution models to improve isoform expression inference in RNA-Seq. - Zhengpeng Wu; Xi Wang 002; Xuegong Zhang (Bioinform., 2011)

Pinpointing transcription factor binding sites from ChIP-seq data with SeqSite. - Xi Wang 002; Xuegong Zhang (BMC Syst. Biol., 2011)

Gene set enrichment analysis of RNA-Seq data: integrating differential expression and splicing. - Xi Wang 002; Murray J. Cairns (BMC Bioinform., 2013)

SeqGSEA: a Bioconductor package for gene set enrichment analysis of RNA-Seq data integrating differential expression and splicing. - Xi Wang 002; Murray J. Cairns (Bioinform., 2014)

NeRFail: Neural Radiance Fields-Based Multiview Adversarial Attack. - Wenxiang Jiang 002; Hanwei Zhang 001; Xi Wang 002; Zhongwen Guo; Hao Wang 003 (AAAI, 2024)