Lineage tracking reveals dynamic relationships of T cells in colorectal cancer. - Lei Zhang; Xin Yu; Liangtao Zheng; Yuanyuan Zhang; Yansen Li; Qiao Fang; Ranran Gao; Boxi Kang; Qiming Zhang; Julie Y. Huang; Hiroyasu Konno; Xinyi Guo; et al. (Nat., 2018)

scRNAss: a single-cell RNA-seq assembler via imputing dropouts and combing junctions. - Juntao Liu; Xiangyu Liu; Xianwen Ren; Guojun Li (Bioinform., 2019)

SSCC: A Novel Computational Framework for Rapid and Accurate Clustering Large-scale Single Cell RNA-seq Data. - Xianwen Ren; Liangtao Zheng; Zemin Zhang (Genom. Proteom. Bioinform., 2019)

scTIM: seeking cell-type-indicative marker from single cell RNA-seq data by consensus optimization. - Zhan-Ying Feng; Xianwen Ren; Yuan Fang; Yining Yin; Chutian Huang; Yimin Zhao; Yong Wang 001 (Bioinform., 2020)

Direct Comparative Analyses of 10X Genomics Chromium and Smart-seq2. - Xiliang Wang; Yao He; Qiming Zhang; Xianwen Ren; Zemin Zhang (Genom. Proteom. Bioinform., 2021)

Computational Strategies and Algorithms for Inferring Cellular Composition of Spatial Transcriptomics Data. - Xiuying Liu; Xianwen Ren (Genom. Proteom. Bioinform., 2024)