Optimal Polygon Cover Problems and Applcations. - Danny Z. Chen; Xiaobo Hu 001; Xiaodong Wu 001 (ISAAC, 2000)

Optimizing the sum of linear fractional functions and applications. - Danny Z. Chen; Ovidiu Daescu; Yang Dai; Naoki Katoh; Xiaodong Wu 001; Jinhui Xu 001 (SODA, 2000)

Maximum Red/Blue Interval Matching with Applications. - Danny Z. Chen; Xiaobo Hu 001; Xiaodong Wu 001 (COCOON, 2001)

Image Segmentation with Monotonicity and Smoothness Constraints. - Danny Z. Chen; Jie Wang 002; Xiaodong Wu 001 (ISAAC, 2001)

Determining an Optimal Penetration Among Weighted Regions in Two and Three Dimensions. - Danny Z. Chen; Ovidiu Daescu; Xiaobo Hu 001; Xiaodong Wu 001; Jinhui Xu 001 (J. Comb. Optim., 2001)

Optimal Net Surface Problems with Applications. - Xiaodong Wu 001; Danny Z. Chen (ICALP, 2002)

Optimal Polygon Cover Problems and Applications. - Danny Z. Chen; Xiaobo Hu 001; Xiaodong Wu 001 (Int. J. Comput. Geom. Appl., 2002)

Image Segmentation with Asteroidality/Tubularity and Smoothness Constraints. - Danny Z. Chen; Jie Wang 002; Xiaodong Wu 001 (Int. J. Comput. Geom. Appl., 2002)

Pairwise Data Clustering and Applications. - Xiaodong Wu 001; Danny Z. Chen; James J. Mason; Steven R. Schmid (COCOON, 2003)

Approximation Algorithms for Multicommodity Flow and Normalized Cut Problems: Implementations and Experimental Study. - Ying Du; Danny Z. Chen; Xiaodong Wu 001 (COCOON, 2004)

Globally Optimal Segmentation of Interacting Surfaces with Geometric Constraints. - Kang Li; Xiaodong Wu 001; Danny Z. Chen; Milan Sonka (CVPR (1), 2004)

Efficient optimal surface detection: theory, implementation, and experimental validation. - Kang Li; Xiaodong Wu 001; Zhixiang Chen 001; Milan Sonka (Image Processing, 2004)

Efficient Algorithms for k-Terminal Cuts on Planar Graphs. - Danny Z. Chen; Xiaodong Wu 001 (Algorithmica, 2004)

Geometric algorithms for static leaf sequencing problems in radiation therapy. - Danny Z. Chen; Xiaobo Sharon Hu; Shuang (Sean) Luan; Chao Wang 002; Xiaodong Wu 001 (Int. J. Comput. Geom. Appl., 2004)

Efficient approximation algorithms for pairwise data clustering and applications. - Xiaodong Wu 001; Danny Z. Chen; James J. Mason; Steven R. Schmid (Int. J. Comput. Geom. Appl., 2004)

Efficient Algorithms for Intensity Map Splitting Problems in Radiation Therapy. - Xiaodong Wu 001 (COCOON, 2005)

Mountain reduction, block matching, and applications in intensity-modulated radiation therapy. - Danny Z. Chen; Xiaobo Sharon Hu; Chao Wang 002; Xiaodong Wu 001 (SCG, 2005)

Simultaneous Segmentation of Multiple Closed Surfaces Using Optimal Graph Searching. - Kang Li; Steven Millington; Xiaodong Wu 001; Danny Z. Chen; Milan Sonka (IPMI, 2005)

Optimal Terrain Construction Problems and Applications in Intensity-Modulated Radiation Therapy. - Danny Z. Chen; Xiaobo Sharon Hu; Shuang Luan; Xiaodong Wu 001; Cedric X. Yu (Algorithmica, 2005)

Efficient Algorithms and Implementations for Optimizing the Sum of Linear Fractional Functions, with Applications. - Danny Z. Chen; Ovidiu Daescu; Yang Dai; Naoki Katoh; Xiaodong Wu 001; Jinhui Xu 001 (J. Comb. Optim., 2005)

The Matrix Orthogonal Decomposition Problem in Intensity-Modulated Radiation Therapy. - Xin Dou; Xiaodong Wu 001; John E. Bayouth; John M. Buatti (COCOON, 2006)

Optimal Surface Segmentation in Volumetric Images-A Graph-Theoretic Approach. - Kang Li; Xiaodong Wu 001; Danny Z. Chen; Milan Sonka (IEEE Trans. Pattern Anal. Mach. Intell., 2006)

Optimal Field Splitting with Feathering in Intensity-Modulated Radiation Therapy. - Xiaodong Wu 001; Xin Dou (AAIM, 2007)

A New Field Splitting Algorithm for Intensity-Modulated Radiation Therapy. - Danny Z. Chen; Mark A. Healy; Chao Wang 002; Xiaodong Wu 001 (COCOON, 2007)

Incorporation of Regional Information in Optimal 3-D Graph Search with Application for Intraretinal Layer Segmentation of Optical Coherence Tomography Images. - Mona Haeker; Xiaodong Wu 001; Michael D. Abràmoff; Randy Kardon; Milan Sonka (IPMI, 2007)

New Algorithm for Field Splitting in Radiation Therapy. - Xiaodong Wu 001; Xin Dou; John E. Bayouth; John M. Buatti (ISAAC, 2007)

Use of Varying Constraints in Optimal 3-D Graph Search for Segmentation of Macular Optical Coherence Tomography Images. - Mona Haeker; Michael D. Abràmoff; Xiaodong Wu 001; Randy Kardon; Milan Sonka (MICCAI (1), 2007)

Automated segmentation of intraretinal layers from macular optical coherence tomography images. - Mona Haeker; Milan Sonka; Randy Kardon; Vinay A. Shah; Xiaodong Wu 001; Michael D. Abràmoff (Image Processing, 2007)

Segmentation of the optic nerve head combining pixel classification and graph search. - Michael B. Merickel; Michael D. Abràmoff; Milan Sonka; Xiaodong Wu 001 (Image Processing, 2007)

The Layered Net Surface Problems in Discrete Geometry and Medical Image Segmentation. - Xiaodong Wu 001; Danny Z. Chen; Kang Li; Milan Sonka (Int. J. Comput. Geom. Appl., 2007)

Globally optimal surface segmentation using regional properties of segmented objects. - Xin Dou; Xiaodong Wu 001; Andreas Wahle; Milan Sonka (CVPR, 2008)

Mountain Reduction, Block Matching, and Applications in Intensity-Modulated Radiation Therapy. - Danny Z. Chen; Xiaobo Sharon Hu; Chao Wang 002; Shuang Luan; Xiaodong Wu 001 (Int. J. Comput. Geom. Appl., 2008)

Intraretinal Layer Segmentation of Macular Optical Coherence Tomography Images Using Optimal 3-D Graph Search. - Mona Kathryn Garvin; Michael D. Abràmoff; Randy Kardon; Stephen R. Russell; Xiaodong Wu 001; Milan Sonka (IEEE Trans. Medical Imaging, 2008)

Optimal multiple surfaces searching for video/image resizing - a graph-theoretic approach. - Dongfeng Han; Xiaodong Wu 001; Milan Sonka (ICCV, 2009)

Optimal Graph Search Segmentation Using Arc-Weighted Graph for Simultaneous Surface Detection of Bladder and Prostate. - Qi Song 001; Xiaodong Wu 001; Yunlong Liu; Mark Smith 005; John M. Buatti; Milan Sonka (MICCAI (1), 2009)

Optimal graph search based image segmentation for objects with complex topologies. - Xiaomin Liu; Danny Z. Chen; Xiaodong Wu 001; Milan Sonka (Image Processing, 2009)

Globally optimal 3D graph search incorporating both edge and regional information: application to aortic MR image segmentation. - Qi Song 001; Xiaodong Wu 001; Xin Dou; Milan Sonka (Image Processing, 2009)

Efficient Algorithms for the Optimal-Ratio Region Detection Problems in Discrete Geometry with Applications. - Xiaodong Wu 001 (Int. J. Comput. Geom. Appl., 2009)

Efficient Algorithm for Optimal Matrix Orthogonal Decomposition Problem in Intensity-Modulated Radiation Therapy. - Xiaodong Wu 001; Xin Dou; John E. Bayouth; John M. Buatti (Int. J. Comput. Geom. Appl., 2009)

Automated 3-D Intraretinal Layer Segmentation of Macular Spectral-Domain Optical Coherence Tomography Images. - Mona Kathryn Garvin; Michael D. Abràmoff; Xiaodong Wu 001; Stephen R. Russell; Trudy L. Burns; Milan Sonka (IEEE Trans. Medical Imaging, 2009)

Simultaneous searching of globally optimal interacting surfaces with shape priors. - Qi Song 001; Xiaodong Wu 001; Yunlong Liu; Milan Sonka; Mona Kathryn Garvin (CVPR, 2010)

Minimizing Total Variation for Field Splitting with Feathering in Intensity-Modulated Radiation Therapy. - Yunlong Liu; Xiaodong Wu 001 (FAW, 2010)

Motion Artifact Reduction in 4D Helical CT: Graph-Based Structure Alignment. - Dongfeng Han; John E. Bayouth; Sudershan Bhatia; Milan Sonka; Xiaodong Wu 001 (MCV, 2010)

Graph Search with Appearance and Shape Information for 3-D Prostate and Bladder Segmentation. - Qi Song 001; Yinxiao Liu; Yunlong Liu; Punam K. Saha; Milan Sonka; Xiaodong Wu 001 (MICCAI (3), 2010)

Fast globally optimal single surface segmentation using regional properties. - Xin Dou; Xiaodong Wu 001 (Image Processing, 2010)

LOGISMOS - Layered Optimal Graph Image Segmentation of Multiple Objects and Surfaces: Cartilage Segmentation in the Knee Joint. - Yin Yin; Xiangmin Zhang; Rachel Williams; Xiaodong Wu 001; Donald D. Anderson; Milan Sonka (IEEE Trans. Medical Imaging, 2010)

Optimal multiple-seams search for image resizing with smoothness and shape prior. - Dongfeng Han; Milan Sonka; John E. Bayouth; Xiaodong Wu 001 (Vis. Comput., 2010)

Feature guided motion artifact reduction with structure-awareness in 4D CT images. - Dongfeng Han; John E. Bayouth; Qi Song 001; Sudershan Bhatia; Milan Sonka; Xiaodong Wu 001 (CVPR, 2011)

Globally Optimal Tumor Segmentation in PET-CT Images: A Graph-Based Co-segmentation Method. - Dongfeng Han; John E. Bayouth; Qi Song 001; Aakant Taurani; Milan Sonka; John M. Buatti; Xiaodong Wu 001 (IPMI, 2011)

Surface-Region Context in Optimal Multi-object Graph-Based Segmentation: Robust Delineation of Pulmonary Tumors. - Qi Song 001; Mingqing Chen; Junjie Bai; Milan Sonka; Xiaodong Wu 001 (IPMI, 2011)

Efficient Algorithms for Segmenting Globally Optimal and Smooth Multi-surfaces. - Lei Xu 006; Branislav Stojkovic; Yongding Zhu; Qi Song 001; Xiaodong Wu 001; Milan Sonka; Jinhui Xu 001 (IPMI, 2011)

Maximum Weight Digital Regions Decomposable into Digital Star-Shaped Regions. - Matt Gibson 001; Dongfeng Han; Milan Sonka; Xiaodong Wu 001 (ISAAC, 2011)

Faster Segmentation Algorithm for Optical Coherence Tomography Images with Guaranteed Smoothness. - Lei Xu 006; Branislav Stojkovic; Hu Ding; Qi Song 001; Xiaodong Wu 001; Milan Sonka; Jinhui Xu 001 (MLMI, 2011)

Region Detection by Minimizing Intraclass Variance With Geometric Constraints, Global Optimality, and Efficient Approximation. - Xiaodong Wu 001; Xin Dou; Andreas Wahle; Milan Sonka (IEEE Trans. Medical Imaging, 2011)

Fast dynamic programming for labeling problems with ordering constraints. - Junjie Bai; Qi Song 001; Olga Veksler; Xiaodong Wu 001 (CVPR, 2012)

Efficient searching of globally optimal and smooth multisurfaces with shape priors. - Lei Xu 006; Branislav Stojkovic; Hu Ding; Qi Song 001; Xiaodong Wu 001; Milan Sonka; Jinhui Xu 001 (Image Processing, 2012)

Globally optimal lung tumor co-segmentation of 4D CT and PET images. - Junjie Bai; Qi Song 001; Sudershan Bhatia; Xiaodong Wu 001 (Image Processing, 2013)

An almost linear time algorithm for field splitting in radiation therapy. - Xiaodong Wu 001; Xin Dou; John E. Bayouth; John M. Buatti (Comput. Geom., 2013)

Optimal Graph Search Based Segmentation of Airway Tree Double Surfaces Across Bifurcations. - Xiaomin Liu; Danny Z. Chen; Merryn H. Tawhai; Xiaodong Wu 001; Eric A. Hoffman; Milan Sonka (IEEE Trans. Medical Imaging, 2013)

Optimal Multiple Surface Segmentation With Shape and Context Priors. - Qi Song 001; Junjie Bai; Mona Kathryn Garvin; Milan Sonka; John M. Buatti; Xiaodong Wu 001 (IEEE Trans. Medical Imaging, 2013)

Optimal Co-Segmentation of Tumor in PET-CT Images With Context Information. - Qi Song 001; Junjie Bai; Dongfeng Han; Sudershan Bhatia; Wenqing Sun; William Rockey; John E. Bayouth; John M. Buatti; Xiaodong Wu 001 (IEEE Trans. Medical Imaging, 2013)

Graph Algorithmic Techniques for Biomedical Image Segmentation. - Mona Kathryn Garvin; Xiaodong Wu 001 (Advanced Computational Approaches to Biomedical Engineering, 2014)

Fully Automatic Segmentation of Hip CT Images via Random Forest Regression-Based Atlas Selection and Optimal Graph Search-Based Surface Detection. - Chengwen Chu; Junjie Bai; Li Liu 017; Xiaodong Wu 001; Guoyan Zheng (ACCV (3), 2014)

Error-Tolerant Scribbles Based Interactive Image Segmentation. - Junjie Bai; Xiaodong Wu 001 (CVPR, 2014)

Graph-based optimal multi-surface segmentation with a star-shaped prior: Application to the segmentation of the optic disc and cup. - Junjie Bai; Mohammad Saleh Miri; Yinxiao Liu; Punam K. Saha; Mona Kathryn Garvin; Xiaodong Wu 001 (ISBI, 2014)

Automated surface segmentation of internal limiting membrane in spectral-domain optical coherence tomography volumes with a deep cup using a 3-D range expansion approach. - Abhay Shah; Jui-Kai Wang; Mona Kathryn Garvin; Milan Sonka; Xiaodong Wu 001 (ISBI, 2014)

Multi-Surface and Multi-Field Co-Segmentation of 3-D Retinal Optical Coherence Tomography. - Hrvoje Bogunovic; Milan Sonka; Young H. Kwon; Pavlina Kemp; Michael D. Abràmoff; Xiaodong Wu 001 (IEEE Trans. Medical Imaging, 2014)

Multiple Surface Segmentation Using Truncated Convex Priors. - Abhay Shah; Junjie Bai; Zhihong Hu; Srinivas R. Sadda; Xiaodong Wu 001 (MICCAI (3), 2015)

MASCG: Multi-Atlas Segmentation Constrained Graph method for accurate segmentation of hip CT images. - Chengwen Chu; Junjie Bai; Xiaodong Wu 001; Guoyan Zheng (Medical Image Anal., 2015)

Optimal Multiple Surface Segmentation with Convex Priors in Irregularly Sampled Space. - Abhay Shah; Junjie Bai; Michael D. Abràmoff; Xiaodong Wu 001 (CoRR, 2016)

Simultaneous Multiple Surface Segmentation Using Deep Learning. - Abhay Shah; Michael D. Abràmoff; Xiaodong Wu 001 (DLMIA/ML-CDS@MICCAI, 2017)

3D Alpha Matting Based Co-segmentation of Tumors on PET-CT Images. - Zisha Zhong; Yusung Kim 003; John M. Buatti; Xiaodong Wu 001 (CMMI/RAMBO/SWITCH@MICCAI, 2017)

Susceptibility to misdiagnosis of adversarial images by deep learning based retinal image analysis algorithms. - Abhay Shah; Stephanie Lynch; Meindert Niemeijer; Ryan Amelon; Warren Clarida; James C. Folk; Stephen R. Russell; Xiaodong Wu 001; Michael D. Abràmoff (ISBI, 2018)

Multi-scale segmentation using deep graph cuts: Robust lung tumor delineation in MVCBCT. - Xiaodong Wu 001; Zisha Zhong; John M. Buatti; Junjie Bai (ISBI, 2018)

Improving tumor co-segmentation on PET-CT images with 3D co-matting. - Zisha Zhong; Yusung Kim 003; Leixin Zhou; Kristin A. Plichta; Bryan Allen; John M. Buatti; Xiaodong Wu 001 (ISBI, 2018)

3D fully convolutional networks for co-segmentation of tumors on PET-CT images. - Zisha Zhong; Yusung Kim 003; Leixin Zhou; Kristin A. Plichta; Bryan Allen; John M. Buatti; Xiaodong Wu 001 (ISBI, 2018)

Optimal multi-object segmentation with novel gradient vector flow based shape priors. - Junjie Bai; Abhay Shah; Xiaodong Wu 001 (Comput. Medical Imaging Graph., 2018)

Outlier Detection using Generative Models with Theoretical Performance Guarantees. - Jirong Yi; Anh Duc Le; Tianming Wang; Xiaodong Wu 001; Weiyu Xu (CoRR, 2018)

Robust Image Segmentation Quality Assessment without Ground Truth. - Leixin Zhou; Wenxiang Deng; Xiaodong Wu 001 (CoRR, 2019)

What does AI see? Deep segmentation networks discover biomarkers for lung cancer survival. - Stephen Baek; Yusen He; Bryan G. Allen; John M. Buatti; Brian J. Smith; Kristin A. Plichta; Steven N. Seyedin; Maggie Gannon; Katherine R. Cabel; Yusung Kim 003; Xiaodong Wu 001 (CoRR, 2019)

Trust but Verify: An Information-Theoretic Explanation for the Adversarial Fragility of Machine Learning Systems, and a General Defense against Adversarial Attacks. - Jirong Yi; Hui Xie; Leixin Zhou; Xiaodong Wu 001; Weiyu Xu; Raghuraman Mudumbai (CoRR, 2019)

3-D Surface Segmentation Meets Conditional Random Fields. - Leixin Zhou; Zisha Zhong; Abhay Shah; Xiaodong Wu 001 (CoRR, 2019)

Optimal surface segmentation with convex priors in irregularly sampled space. - Abhay Shah; Michael D. Abràmoff; Xiaodong Wu 001 (Medical Image Anal., 2019)

Do Deep Minds Think Alike? Selective Adversarial Attacks for Fine-Grained Manipulation of Multiple Deep Neural Networks. - Zain Khan; Jirong Yi; Raghu Mudumbai; Xiaodong Wu 001; Weiyu Xu (CoRR, 2020)

Unsupervised anomaly localization using VAE and beta-VAE. - Leixin Zhou; Wenxiang Deng; Xiaodong Wu 001 (CoRR, 2020)

Globally Optimal Surface Segmentation using Deep Learning with Learnable Smoothness Priors. - Leixin Zhou; Xiaodong Wu 001 (CoRR, 2020)

Globally Optimal Segmentation of Mutually Interacting Surfaces using Deep Learning. - Hui Xie; Zhe Pan; Leixin Zhou; Fahim A. Zaman; Danny Ziyi Chen; Jost B. Jonas; Yaxing Wang; Xiaodong Wu 001 (CoRR, 2020)

Optimal Pooling Matrix Design for Group Testing with Dilution (Row Degree) Constraints. - Jirong Yi; Myung Cho; Xiaodong Wu 001; Raghu Mudumbai; Weiyu Xu (CoRR, 2020)

Joint Calibrationless Reconstruction and Segmentation of Parallel MRI. - Aniket Pramanik; Xiaodong Wu 001; Mathews Jacob (CoRR, 2021)

Automated macular OCT retinal surface segmentation in cases of severe glaucoma using deep learning. - Hui Xie; Jui-Kai Wang; Randy H. Kardon; Mona Kathryn Garvin; Xiaodong Wu 001 (Image Processing, 2022)

A deep learning network with differentiable dynamic programming for retina OCT surface segmentation. - Hui Xie; Weiyu Xu; Xiaodong Wu 001 (CoRR, 2022)

KCB-Net: A 3D knee cartilage and bone segmentation network via sparse annotation. - Yaopeng Peng; Hao Zheng 006; Peixian Liang; Lichun Zhang; Fahim A. Zaman; Xiaodong Wu 001; Milan Sonka; Danny Z. Chen (Medical Image Anal., 2022)

Use of compressed sensing to expedite high-throughput diagnostic testing for COVID-19 and beyond. - Kody A. Waldstein; Jirong Yi; Myung Cho; Raghu Mudumbai; Xiaodong Wu 001; Steven M. Varga; Weiyu Xu (PLoS Comput. Biol., 2022)

Error Correction Codes for Testing Chemical/Biological Agents: Using Pooled Testing to Increase Test Reliability. - Jirong Yi; Myung Cho; Jingchao Gao; Xiaodong Wu 001; Weiyu Xu; Raghu Mudumbai (ACSSC, 2023)

Trust, but Verify: Robust Image Segmentation using Deep Learning. - Fahim Ahmed Zaman; Xiaodong Wu 001; Weiyu Xu; Milan Sonka; Raghuraman Mudumbai (ACSSC, 2023)

Provable Multi-instance Deep AUC Maximization with Stochastic Pooling. - Dixian Zhu; Bokun Wang; Zhi Chen 025; Yaxing Wang; Milan Sonka; Xiaodong Wu 001; Tianbao Yang (ICML, 2023)

Model-Informed Deep Learning for Surface Segmentation in Medical Imaging. - Xiaodong Wu 001; Leixin Zhou; Fahim A. Zaman; Bensheng Qiu; John M. Buatti (IPMI, 2023)

gcDLSeg: Integrating Graph-cut into Deep Learning for Binary Semantic Segmentation. - Hui Xie; Weiyu Xu; Yaxing Wang; John M. Buatti; Xiaodong Wu 001 (CoRR, 2023)

Segmentation quality assessment by automated detection of erroneous surface regions in medical images. - Fahim A. Zaman; Lichun Zhang; Honghai Zhang; Milan Sonka; Xiaodong Wu 001 (Comput. Biol. Medicine, 2023)

Diagnosis of Takotsubo Syndrome by Robust Feature Selection from the Complex Latent Space of DL-Based Segmentation Network. - Fahim Ahmed Zaman; Wahidul Alam; Tarun Kanti Roy; Amanda Chang; Kan Liu 003; Xiaodong Wu 001 (ISBI, 2024)

Surf-CDM: Score-Based Surface Cold-Diffusion Model for Medical Image Segmentation. - Fahim Ahmed Zaman; Mathews Jacob; Amanda Chang; Kan Liu 003; Milan Sonka; Xiaodong Wu 001 (ISBI, 2024)

Towards unlocking the mystery of adversarial fragility of neural networks. - Jingchao Gao; Raghu Mudumbai; Xiaodong Wu 001; Jirong Yi; Catherine Xu; Hui Xie; Weiyu Xu (CoRR, 2024)

Denoising Diffusions in Latent Space for Medical Image Segmentation. - Fahim Ahmed Zaman; Mathews Jacob; Amanda Chang; Kan Liu 003; Milan Sonka; Xiaodong Wu 001 (CoRR, 2024)

Outlier Detection Using Generative Models With Theoretical Performance Guarantees. - Jirong Yi; Jingchao Gao; Tianming Wang; Xiaodong Wu 001; Weiyu Xu (IEEE Trans. Inf. Theory, 2025)