G4Atlas: a comprehensive transcriptome-wide G-quadruplex database. - Haopeng Yu; Yiman Qi; Bibo Yang; Xiaofei Yang 009; Yiliang Ding (Nucleic Acids Res., 2023)

An interpretable RNA foundation model for exploring functional RNA motifs in plants. - Haopeng Yu; Heng Yang 008; Wenqing Sun; Zongyun Yan; Xiaofei Yang 009; Huakun Zhang; Yiliang Ding; Ke Li 001 (Nat. Mac. Intell., 2024)