RDfolder: a web server for prediction of RNA secondary structure. - Xiaomin Ying; Hong Luo; Jingchu Luo; Wuju Li (Nucleic Acids Res., 2004)

BioSunMS: a plug-in-based software for the management of patients information and the analysis of peptide profiles from mass spectrometry. - Yuan Cao; Na Wang; Xiaomin Ying; Ailing Li; Hengsha Wang; Xuemin Zhang; Wuju Li (BMC Medical Informatics Decis. Mak., 2009)

Predicting sRNAs and Their Targets in Bacteria. - Wuju Li; Xiaomin Ying; Qixuan Lu; Linxi Chen (Genom. Proteom. Bioinform., 2012)

Predicting linear B-cell epitopes using amino acid anchoring pair composition. - Weike Shen; Yuan Cao; Lei Cha; Xufei Zhang; Xiaomin Ying; Wei Zhang; Kun Ge; Wuju Li; Li Zhong (BioData Min., 2015)

Precision Medicine: What Challenges Are We Facing? - Yu Xue 001; Eric-Wubbo Lameijer; Kai Ye 001; Kunlin Zhang; Suhua Chang; Xiaoyue Wang; Jianmin Wu; Ge Gao; Fangqing Zhao; Jian Li; Chunsheng Han; Shuhua Xu; et al. (Genom. Proteom. Bioinform., 2016)

MetaLogo: a heterogeneity-aware sequence logo generator and aligner. - Yaowen Chen; Zhen He; Yahui Men; Guohua Dong; Shuofeng Hu; Xiaomin Ying (Briefings Bioinform., 2022)

Discriminative Geometric-Structure-Based Deep Hashing for Large-Scale Image Retrieval. - Guohua Dong; Xiang Zhang 008; Xiaobo Shen 001; Long Lan; Zhigang Luo; Xiaomin Ying (IEEE Trans. Cybern., 2023)

When CLIP meets cross-modal hashing retrieval: A new strong baseline. - Xinyu Xia 002; Guohua Dong; Fengling Li 001; Lei Zhu 002; Xiaomin Ying (Inf. Fusion, 2023)

Bridging the Vision-Brain Gap with an Uncertainty-Aware Blur Prior. - Haitao Wu; Qing Li; Changqing Zhang; Zhen He; Xiaomin Ying (CVPR, 2025)

Memory recall: Retrieval-Augmented mind reconstruction for brain decoding. - Yuxiao Zhao; Guohua Dong; Lei Zhu 002; Xiaomin Ying (Inf. Fusion, 2025)

A Survey on fMRI-based Brain Decoding for Reconstructing Multimodal Stimuli. - Pengyu Liu; Guohua Dong; Dan Guo 001; Kun Li 008; Fengling Li; Xun Yang 001; Meng Wang 001; Xiaomin Ying (CoRR, 2025)