PL-search: a profile-link-based search method for protein remote homology detection. - Xiaopeng Jin; Qing Liao 001; Bin Liu 014 (Briefings Bioinform., 2021)

S2L-PSIBLAST: a supervised two-layer search framework based on PSI-BLAST for protein remote homology detection. - Xiaopeng Jin; Qing Liao 001; Bin Liu 014 (Bioinform., 2021)

SMI-BLAST: a novel supervised search framework based on PSI-BLAST for protein remote homology detection. - Xiaopeng Jin; Qing Liao 001; Hang Wei 005; Jun Zhang 078; Bin Liu 014 (Bioinform., 2021)

Correction to: PHR-search: a search framework for protein remote homology detection based on the predicted protein hierarchical relationships. - Xiaopeng Jin; Xiaoling Luo 001; Bin Liu 014 (Briefings Bioinform., 2022)

PHR-search: a search framework for protein remote homology detection based on the predicted protein hierarchical relationships. - Xiaopeng Jin; Xiaoling Luo 001; Bin Liu 014 (Briefings Bioinform., 2022)

Fed-DR-Filter: Using global data representation to reduce the impact of noisy labels on the performance of federated learning. - Shaoming Duan; Chuanyi Liu; Zhengsheng Cao; Xiaopeng Jin; Peiyi Han (Future Gener. Comput. Syst., 2022)

MVCINN: Multi-View Diabetic Retinopathy Detection Using a Deep Cross-Interaction Neural Network. - Xiaoling Luo 001; Chengliang Liu 003; Waikeung Wong; Jie Wen 001; Xiaopeng Jin; Yong Xu 001 (AAAI, 2023)

CFAGO: cross-fusion of network and attributes based on attention mechanism for protein function prediction. - Zhourun Wu; Mingyue Guo; Xiaopeng Jin; Junjie Chen 004; Bin Liu 014 (Bioinform., 2023)

HT-Fed-GAN: Federated Generative Model for Decentralized Tabular Data Synthesis. - Shaoming Duan; Chuanyi Liu; Peiyi Han; Xiaopeng Jin; Xinyi Zhang; Tianyu He; Hezhong Pan; Xiayu Xiang (Entropy, 2023)

A comprehensive review and comparison of existing computational methods for protein function prediction. - Baohui Lin; Xiaoling Luo 001; Yumeng Liu; Xiaopeng Jin (Briefings Bioinform., 2024)

IDP-EDL: enhancing intrinsically disordered protein prediction by combining protein language model and ensemble deep learning. - Junxi Xie; Xiaopeng Jin; Hang Wei 005; Saisai Sun; Yumeng Liu (Briefings Bioinform., 2024)

A deep convolutional neural network for diabetic retinopathy detection via mining local and long-range dependence. - Xiaoling Luo 001; Wei Wang 169; Yong Xu 001; Zhihui Lai 001; Xiaopeng Jin; Bob Zhang 001; David Zhang 001 (CAAI Trans. Intell. Technol., 2024)

iMFP-LG: Identify Novel Multi-functional Peptides Using Protein Language Models and Graph-based Deep Learning. - Jiawei Luo; Kejuan Zhao; Junjie Chen 004; Caihua Yang; Fuchuan Qu; Yumeng Liu; Xiaopeng Jin; Ke Yan 003; Yang Zhang 057; Bin Liu 014 (Genom. Proteom. Bioinform., 2025)

A Lesion-Fusion Neural Network for Multi-View Diabetic Retinopathy Grading. - Xiaoling Luo 001; Qihao Xu; Zhihua Wang 002; Chao Huang 008; Chengliang Liu 003; Xiaopeng Jin; Jianguo Zhang 001 (IEEE J. Biomed. Health Informatics, 2025)

SEGT-GO: a graph transformer method based on PPI serialization and explanatory artificial intelligence for protein function prediction. - Yansong Wang; Yundong Sun; Baohui Lin; Haotian Zhang; Xiaoling Luo 001; Yumeng Liu; Xiaopeng Jin; Dongjie Zhu (BMC Bioinform., 2025)