powerEQTL: an R package and shiny application for sample size and power calculation of bulk tissue and single-cell eQTL analysis. - Xianjun Dong; Xiaoqi Li 018; Tzuu-Wang Chang; Clemens R. Scherzer; Scott T. Weiss; Weiliang Qiu (Bioinform., 2021)

SnapHiC-D: a computational pipeline to identify differential chromatin contacts from single-cell Hi-C data. - Lindsay Lee; Miao Yu; Xiaoqi Li 018; Chenxu Zhu; Yanxiao Zhang; Hongyu Yu; Ziyin Chen; Shreya Mishra; Bing Ren; Yun Li; Ming Hu 001 (Briefings Bioinform., 2023)