An Operational Semantics of an Event-Driven System-Level Simulator. - Xiaoqing Peng; Huibiao Zhu; Jifeng He 001; Naiyong Jin (SEW, 2006)

Denotational Approach to an Event-Driven System-Level Language. - Huibiao Zhu; Jifeng He 001; Xiaoqing Peng; Naiyong Jin (UTP, 2008)

Active Protein Interaction Network and Its Application on Protein Complex Detection. - Jianxin Wang 001; Xiaoqing Peng; Min Li 007; Yong Luo; Yi Pan 001 (BIBM, 2011)

An effective method for refining predicted protein complexes based on protein activity and the mechanism of protein complex formation. - Jianxin Wang 001; Xiaoqing Peng; Qianghua Xiao; Min Li 007; Yi Pan 001 (BMC Syst. Biol., 2013)

An efficient method to identify essential proteins for different species by integrating protein subcellular localization information. - Xiaoqing Peng; Jianxin Wang 001; Jiancheng Zhong; Junwei Luo; Yi Pan 001 (BIBM, 2015)

Re-alignment of the unmapped reads with base quality score. - Xiaoqing Peng; Jianxin Wang 001; Zhen Zhang 024; Qianghua Xiao; Min Li 007; Yi Pan 001 (BMC Bioinform., 2015)

Sparsity-Boosted Detection for Large MIMO Systems. - Xiaoqing Peng; Weimin Wu 003; Jun Sun 020; Yingzhuang Liu (IEEE Commun. Lett., 2015)

Sparse K-best detector for generalised space shift keying in large-scale multiple-input-multiple-output systems. - Xiaoqing Peng; Weimin Wu 003; Jun Sun 020; Yingzhuang Liu (IET Commun., 2015)

Sparsity-aware, channel order-blind pilot placement with channel estimation in orthogonal frequency division multiplexing systems. - Xiaoqing Peng; Weimin Wu 003; Jun Sun 020; Yingzhuang Liu; F. Y. Li (IET Commun., 2015)

An Energy-Efficient and Relay Hop Bounded Mobile Data Gathering Algorithm in Wireless Sensor Networks. - Ling Chen 003; Jianxin Wang 001; Xiaoqing Peng; Xiaoyan Kui (Int. J. Distributed Sens. Networks, 2015)

Drug repositioning based on comprehensive similarity measures and Bi-Random walk algorithm. - Huimin Luo; Jianxin Wang 001; Min Li 007; Junwei Luo; Xiaoqing Peng; Fang-Xiang Wu; Yi Pan 001 (Bioinform., 2016)

Information Privacy of Cyber Transportation System: Opportunities and Challenges. - Meng Han; Lei Li 021; Xiaoqing Peng; Zhen Hong; Mohan Li (RITT, 2017)

Protein-protein interactions: detection, reliability assessment and applications. - Xiaoqing Peng; Jianxin Wang 001; Wei Peng 004; Fang-Xiang Wu; Yi Pan 001 (Briefings Bioinform., 2017)

Detecting protein complex based on hierarchical compressing network embedding. - Xiangmao Meng; Xiaoqing Peng; Fang-Xiang Wu; Min Li 007 (BIBM, 2019)

A Global Similarity Learning for Clustering of Single-Cell RNA-Seq Data. - Xiaoshu Zhu; Lilu Guo; Yunpei Xu; Hong-Dong Li; Xingyu Liao; Fang-Xiang Wu; Xiaoqing Peng (BIBM, 2019)

A network enhancement-based method for clustering of single cell RNA-seq data. - Xiaoshu Zhu; Lilu Guo; Rongyuan Li; Yunpei Xu; Fang-Xiang Wu; Xiaoqing Peng; Hong-Dong Li (Int. J. Data Min. Bioinform., 2020)

SCOTCluster: Deep Clustering with Optimal Transport for Large-scale Single-cell RNA-seq Data. - Faning Long; Xiaojun Ding; Xiaoqing Peng; Jianxin Wang 001; Xiaoshu Zhu (BIBM, 2021)

ScDA: A Denoising AutoEncoder Based Dimensionality Reduction for Single-cell RNA-seq Data. - Xiaoshu Zhu; Yongchang Lin; Jian Li; Jianxin Wang 001; Xiaoqing Peng (ISBRA, 2021)

Identifying the tissues-of-origin of circulating cell-free DNAs is a promising way in noninvasive diagnostics. - Xiaoqing Peng; Hong-Dong Li; Fang-Xiang Wu; Jianxin Wang 001 (Briefings Bioinform., 2021)

Protein interaction networks: centrality, modularity, dynamics, and applications. - Xiangmao Meng; Wenkai Li; Xiaoqing Peng; Yaohang Li; Min Li 007 (Frontiers Comput. Sci., 2021)

An integration of deep learning with feature fusion for protein-protein interaction prediction. - Hoai-Nhan Tran; Phuc-Xuan-Quynh Nguyen; Xiaoqing Peng; Jianxin Wang 001 (BIBM, 2022)

An Eye-movement Study of Pronoun Resolutions by Chinese-speaking Learners. - Xiaoqing Peng (CCRIS, 2022)

STgcor: A Distribution-Based Correlation Measurement Method for Spatial Transcriptome Data. - Xiaoshu Zhu; Liyuan Pang; Wei Lan; Shuang Meng; Xiaoqing Peng (ISBRA, 2022)

Metrics for evaluating differentially methylated region sets predicted from BS-seq data. - Xiaoqing Peng; Hongze Luo; Xiangyan Kong; Jianxin Wang 001 (Briefings Bioinform., 2022)

Drug repositioning based on multi-view learning with matrix completion. - Yixin Yan; Mengyun Yang; Haochen Zhao; Guihua Duan; Xiaoqing Peng; Jianxin Wang 001 (Briefings Bioinform., 2022)

AlzCode: a platform for multiview analysis of genes related to Alzheimer's disease. - Cui-Xiang Lin; Hong-Dong Li; Chao Deng; Shannon Erhardt; Jun Wang 153; Xiaoqing Peng; Jianxin Wang 001 (Bioinform., 2022)

Dimensionality Reduction of Single-Cell RNA Sequencing Data by Combining Entropy and Denoising AutoEncoder. - Xiaoshu Zhu; Jian Li; Yongchang Lin; Liquan Zhao; Jian-Xin Wang 001; Xiaoqing Peng (J. Comput. Biol., 2022)

Recent Changes in Groundwater and Surface Water in Large Pan-Arctic River Basins. - Hong Lin; Xiao Cheng 001; Lei Zheng; Xiaoqing Peng; Wei Feng; Fukai Peng (Remote. Sens., 2022)

Noninvasive diagnosis of hepatocellular carcinoma by integrating the genetic, epigenetic and fragmentation features of cell-free DNAs. - Xiaoqing Peng; Junjie You; Wanxin Cui; Mengxi Zou (BIBM, 2023)

IsoCell: An Approach to Enhance Single Cell Clustering by Integrating Isoform-Level Expression Through Orthogonal Projection. - Yingyi Liu; Hong-Dong Li; Yunpei Xu; Yi-Wei Liu; Xiaoqing Peng; Jianxin Wang 001 (IEEE ACM Trans. Comput. Biol. Bioinform., 2023)

ADmeth: A Manually Curated Database for the Differential Methylation in Alzheimer's Disease. - Xiaoqing Peng; Wenjin Zhang; Wanxin Cui; Binrong Ding; Qingtong Lyu; Jianxin Wang 001 (IEEE ACM Trans. Comput. Biol. Bioinform., 2023)

CATAD: exploring topologically associating domains from an insight of core-attachment structure. - Xiaoqing Peng; Yiming Li; Mengxi Zou; Xiangyan Kong; Yu Sheng (Briefings Bioinform., 2023)

A Gene Correlation Measurement Method for Spatial Transcriptome Data Based on Partitioning and Distribution. - Xiaoshu Zhu; Liyuan Pang; Xiaojun Ding; Wei Lan; Shuang Meng; Xiaoqing Peng (J. Comput. Biol., 2023)

Spatio-Temporal Characteristics and Differences in Snow Density between the Tibet Plateau and the Arctic. - Wenyu Zhao; Cuicui Mu; Xiaodong Wu; Xinyue Zhong; Xiaoqing Peng; Yijing Liu; Yanhua Sun; Benben Liang; Tingjun Zhang (Remote. Sens., 2023)

Noninvasive Diagnosis of Cancer Based on the Heterogeneity and Fragmentation Features of Cell-Free Mitochondrial DNA. - Xiaoqing Peng; Wenlong Jie; Zihao Li; Junjie You; Wentong Feng (ISBRA (2), 2024)

EPIMR: Prediction of Enhancer-Promoter Interactions by Multi-Scale ResNet on Image Representation. - Qiaozhen Meng; Yinuo Lyu; Xiaoqing Peng; Junhai Xu; Jijun Tang; Fei Guo 001 (Big Data Min. Anal., 2024)

AGImpute: imputation of scRNA-seq data based on a hybrid GAN with dropouts identification. - Xiaoshu Zhu; Shuang Meng; Gaoshi Li; Jian-Xin Wang 001; Xiaoqing Peng (Bioinform., 2024)

Observed Retrogressive Thaw Slump Evolution in the Qilian Mountains. - Xingyun Liu; Xiaoqing Peng; Yongyan Zhang; Oliver W. Frauenfeld; Gang Wei; Guanqun Chen; Yuan Huang; Cuicui Mu; Jun Du (Remote. Sens., 2024)

A Chinese medical named entity recognition method considering length diversity of entities. - Hongyu Zhang; Long Lyu; Weifu Chang; Yuexin Zhao; Xiaoqing Peng (Eng. Appl. Artif. Intell., 2025)