A systematic evaluation of methods for cell phenotype classification using single-cell RNA sequencing data. - Xiaowen Cao 002; Li Xing; Elham Majd; Hua He; Junhua Gu; Xuekui Zhang (CoRR, 2021)

Novel machine learning model for predicting cancer drugs' susceptibilities and discovering novel treatments. - Xiaowen Cao 002; Li Xing; Hao Ding; He Li; Yushan Hu; Yao Dong; Hua He; Junhua Gu; Xuekui Zhang (J. Biomed. Informatics, 2025)

scAGCI: an anchor graph-based method for cell clustering from integrated scRNA-seq and scATAC-seq data. - Yao Dong; Jiaxue Zhang; Jin Shi; Yushan Hu; Xiaowen Cao 002; Yongfeng Dong; Xuekui Zhang (Briefings Bioinform., 2025)

MOH: A Novel Multilayer Multi-Omics Heterogeneous Graph for Single-Cell Clustering. - Yao Dong; Chen Chen; Jin Shi; Yushan Hu; Xiaowen Cao 002; Yongfeng Dong; Xuekui Zhang (IEEE J. Biomed. Health Informatics, 2026)