Gated-GPS: enhancing protein-protein interaction site prediction with scalable learning and imbalance-aware optimization. - Xin Gao 026; Hanqun Cao; Jinpeng Li 004; Jiezhong Qiu; Guangyong Chen; Pheng-Ann Heng (Briefings Bioinform., 2025)

PLAME: Leveraging Pretrained Language Models to Generate Enhanced Protein Multiple Sequence Alignments. - Hanqun Cao; Xinyi Zhou 010; Zijun Gao; Chenyu Wang; Xin Gao 026; Zhi Zhang; Chunbin Gu; Ge Liu; Pheng-Ann Heng (CoRR, 2025)