EUP: Enhanced cross-species prediction of ubiquitination sites via a conditional variational autoencoder network based on ESM2. - Junhao Liu; Zeyu Luo; Rui Wang; Xin Li 253; Yawen Sun; Zongqing Chen 003; Yu-Juan Zhang (PLoS Comput. Biol., 2025)

A multi-view collaborative heterogeneous graph neural network with semantic- and relation-aware for drug-disease association prediction. - Jinzhou Wu; Donglin He; Xin Li 253; Rui Wang; Yujuan Zhang (Eng. Appl. Artif. Intell., 2026)