A dynamic Bayesian network approach to protein secondary structure prediction. - Xin-Qiu Yao; Huaiqiu Zhu; Zhen-Su She (BMC Bioinform., 2008)

Integrating protein structural dynamics and evolutionary analysis with Bio3D. - Lars Skjærven; Xin-Qiu Yao; Guido Scarabelli; Barry J. Grant (BMC Bioinform., 2014)

Online interactive analysis of protein structure ensembles with Bio3D-web. - Lars Skjærven; Shashank Jariwala; Xin-Qiu Yao; Barry J. Grant (Bioinform., 2016)

Elucidating Allosteric Communications in Proteins with Difference Contact Network Analysis. - Xin-Qiu Yao; Mohamed Momin; Donald Hamelberg (J. Chem. Inf. Model., 2018)

Comparative structural dynamic analysis of GTPases. - Hongyang Li; Xin-Qiu Yao; Barry J. Grant (PLoS Comput. Biol., 2018)

Establishing a Framework of Using Residue-Residue Interactions in Protein Difference Network Analysis. - Xin-Qiu Yao; Mohamed Momin; Donald Hamelberg (J. Chem. Inf. Model., 2019)

Evolving Mutational Buildup in HIV-1 Protease Shifts Conformational Dynamics to Gain Drug Resistance. - Michael Souffrant; Xin-Qiu Yao; Donald Hamelberg (J. Chem. Inf. Model., 2023)