A Novel Method to Predict Essential Proteins Based on Diffusion Distance Networks. - Bihai Zhao; Xiao Han; Xiner Liu; Yingchun Luo; Sai Hu; Zhihong Zhang; Lei Wang 069 (IEEE Access, 2020)

Struggling to Detect Struggle in Students Playing a Science Exploration Game. - Xiner Liu; Stefan Slater; Juliana Ma. Alexandra L. Andres; Luke Swanson; Jennifer Scianna; David J. Gagnon; Ryan Shaun Baker (CHI PLAY (Companion), 2023)

The Stories We Tell: Uncovering Hidden Narratives in History Textbooks Through Epistemic Network Analysis. - Juhan Kim; Amanda Barany; Xiner Liu; Andres Felipe Zambrano (ICQE, 2023)

Decoding Player Behavior: Analyzing Reasons for Player Quitting Using Log Data from Puzzle Game Baba Is You. - Xiner Liu; Basel Hussein; Amanda Barany; Ryan S. Baker 001; Bodong Chen (ICQE, 2023)

A Case for (Inter)Action: The Role of Log Data in QE. - Jennifer Scianna; Xiner Liu; Stefan Slater; Ryan S. Baker 001 (ICQE, 2023)

From nCoder to ChatGPT: From Automated Coding to Refining Human Coding. - Andres Felipe Zambrano; Xiner Liu; Amanda Barany; Ryan S. Baker 001; Juhan Kim; Nidhi Nasiar (ICQE, 2023)

Improving acetoin production through construction of a genome-scale metabolic model. - Jinyi Qian; Yuzhou Wang; Xiner Liu; Zijian Hu; Nan Xu; Yuetong Wang; Tianqiong Shi; Chao Ye (Comput. Biol. Medicine, 2023)

ChatGPT for Education Research: Exploring the Potential of Large Language Models for Qualitative Codebook Development. - Amanda Barany; Nidhi Nasiar; Chelsea Porter; Andres Felipe Zambrano; Juliana Ma. Alexandra L. Andres; Dara Bright; Mamta Shah; Xiner Liu; Sabrina Gao; Jiayi Zhang 004; Shruti Mehta; Jaeyoon Choi; et al. (AIED (2), 2024)

De-Identifying Student Personally Identifying Information with GPT-4. - Shreya Singhal; Andres Felipe Zambrano; Maciej Pankiewicz; Xiner Liu; Chelsea Porter; Ryan S. Baker 001 (EDM, 2024)

Identifying When and Why Students Choose to Quit Jobs in a Science Exploration Game. - Xiner Liu; Stefan Slater; Luke Swanson; Shari J. Metcalf; David J. Gagnon; Ryan S. Baker 001 (JCSG, 2024)

Integrating Large Language Models and Machine Learning to Detect Struggle in Educational Games. - Xiner Liu; Zhanlan Wei; Ryan S. Baker 001; Shari J. Metcalf; Jiayi Zhang 004; Amanda Barany; Stefan Slater; Luke Swanson; David J. Gagnon (AIED (5), 2025)

Language Models and Dialect Differences. - Jaclyn Ocumpaugh; Xiner Liu; Andres Felipe Zambrano (LAK, 2025)

Qualitative Coding with GPT-4: Where it Works Better. - Xiner Liu; Andres Felipe Zambrano; Ryan S. Baker 001; Amanda Barany; Jaclyn Ocumpaugh; Jiayi Zhang 004; Maciej Pankiewicz; Nidhi Nasiar; Zhanlan Wei (J. Learn. Anal., 2025)