Computable Eligibility Criteria through Ontology-driven Data Access: A Case Study of Hepatitis C Virus Trials. - Hansi Zhang; Zhe He 001; Xing He 003; Yi Guo 005; David R. Nelson; François Modave; Yonghui Wu; William R. Hogan; Mattia Prosperi; Jiang Bian 001 (AMIA, 2018)

Prototyping an Interactive Visualization of Dietary Supplement Knowledge Graph. - Xing He 003; Rui Zhang 028; Rubina F. Rizvi; Jake Vasilakes; Xi Yang 015; Yi Guo 005; Zhe He 001; Mattia Prosperi; Jiang Bian 001 (BIBM, 2018)

Assessing Mental Health Signals Among Sexual and Gender Minorities using Twitter Data. - Yunpeng Zhao; Yi Guo 005; Xing He 003; Jinhai Huo; Yonghui Wu; Xi Yang 015; Jiang Bian 001 (ICHI Workshops, 2018)

Towards an Interactive Visualization for Dietary Supplement Knowledge Graph. - Xing He 003; Jiang Bian 001 (ICHI, 2019)

STAT: A Web-based Semantic Text Annotation Tool to Assist Building Mental Health Knowledge Base. - Xing He 003; Hansi Zhang; Xi Yang 015; Yi Guo 005; Jiang Bian 001 (ICHI, 2019)

Aero: An Evidence-based Semantic Web Knowledge Base of Cancer Behavioral Risk Factors. - Hansi Zhang; Xing He 003; Tyler Harrison; Jiang Bian 001 (SEPDA@ISWC, 2019)

ALOHA: developing an interactive graph-based visualization for dietary supplement knowledge graph through user-centered design. - Xing He 003; Rui Zhang 028; Rubina F. Rizvi; Jake Vasilakes; Xi Yang 015; Yi Guo 005; Zhe He 001; Mattia Prosperi; Jinhai Huo; Jordan Alpert; Jiang Bian 001 (BMC Medical Informatics Decis. Mak., 2019)

Developing and Validating a Computable Phenotype for the Identification of Transgender and Gender Nonconforming Individuals and Subgroups. - Yi Guo 005; Xing He 003; Tianchen Lyu; Hansi Zhang; Yonghui Wu; Xi Yang 015; Zhaoyi Chen; Merry J. Markham; François Modave; Mengjun Xie; William R. Hogan; Christopher A. Harle; et al. (AMIA, 2020)

When text simplification is not enough: could a graph-based visualization facilitate consumers' comprehension of dietary supplement information? - Xing He 003; Rui Zhang 028; Jordan Alpert; Sicheng Zhou; Terrence J. Adam; Aantaki Raisa; Yifan Peng 002; Hansi Zhang; Jiang Bian 001 (CoRR, 2020)

Assessing mental health signals among sexual and gender minorities using Twitter data. - Yunpeng Zhao; Yi Guo 005; Xing He 003; Yonghui Wu; Xi Yang 015; Mattia Prosperi; Yanghua Jin; Jiang Bian 001 (Health Informatics J., 2020)

User-centered design of a web-based crowdsourcing-integrated semantic text annotation tool for building a mental health knowledge base. - Xing He 003; Hansi Zhang; Jiang Bian 001 (J. Biomed. Informatics, 2020)

Causal inference and counterfactual prediction in machine learning for actionable healthcare. - Mattia Prosperi; Yi Guo 005; Matthew Sperrin; James S. Koopman; Jae S. Min; Xing He 003; Shannan N. Rich; Mo Wang; Iain E. Buchan; Jiang Bian 001 (Nat. Mach. Intell., 2020)

Data and Model Biases in Social Media Analyses: A Case Study of COVID-19 Tweets. - Yunpeng Zhao; Pengfei Yin; Yongqiu Li; Xing He 003; Jingcheng Du; Cui Tao; Yi Guo 005; Mattia Prosperi; Pierangelo Veltri; Xi Yang 015; Yonghui Wu; Jiang Bian 001 (AMIA, 2021)

Impacts of Eligibility Criteria on Trial Participants' Age in Alzheimer's Disease Clinical Trials. - Aokun Chen; Qian Li 034; Xing He 003; Michael Jaffee; William R. Hogan; Fei Wang 001; Yi Guo 005; Jiang Bian 001 (AMIA, 2022)

A Preliminary Study of Extracting Pulmonary Nodules and Nodule Characteristics from Radiology Reports Using Natural Language Processing. - Shuang Yang; Xi Yang 015; Tianchen Lyu; Xing He 003; Dejana Braithwaite; Hiren J. Mehta; Yi Guo 005; Yonghui Wu; Jiang Bian 001 (ICHI, 2022)

A scoping review of semantic integration of health data and information. - Hansi Zhang; Tianchen Lyu; Pengfei Yin; Sarah Bost; Xing He 003; Yi Guo 005; Mattia Prosperi; William R. Hogan; Jiang Bian 001 (Int. J. Medical Informatics, 2022)

Biases in using social media data for public health surveillance: A scoping review. - Yunpeng Zhao; Xing He 003; Zheng Feng; Sarah Bost; Mattia Prosperi; Yonghui Wu; Yi Guo 005; Jiang Bian 001 (Int. J. Medical Informatics, 2022)

Assess the documentation of cognitive tests and biomarkers in electronic health records via natural language processing for Alzheimer's disease and related dementias. - Zhaoyi Chen; Hansi Zhang; Xi Yang 015; Songzi Wu; Xing He 003; Jie Xu 012; Jingchuan Guo; Mattia Prosperi; Fei Wang 001; Hua Xu 001; Yong Chen 016; Hui Hu; et al. (Int. J. Medical Informatics, 2023)

Classification of Benign and Malignant Renal Tumors Based on CT Scans and Clinical Data Using Machine Learning Methods. - Jie Xu 012; Xing He 003; Wei Shao; Jiang Bian 001; Russell Terry (Informatics, 2023)

Evaluating site-of-care-related racial disparities in kidney graft failure using a novel federated learning framework. - Jiayi Tong; Yishan Shen; Alice Xu; Xing He 003; Chongliang Luo; Mackenzie J. Edmondson; Dazheng Zhang; Yiwen Lu; Chao Yan 004; Ruowang Li; Lianne Siegel; Lichao Sun 001; et al. (J. Am. Medical Informatics Assoc., 2024)

Extracting Pulmonary Nodules and Nodule Characteristics from Radiology Reports of Lung Cancer Screening Patients Using Transformer Models. - Shuang Yang; Xi Yang 015; Tianchen Lyu; James L. Huang; Aokun Chen; Xing He 003; Dejana Braithwaite; Hiren J. Mehta; Yonghui Wu; Yi Guo 005; Jiang Bian 001 (J. Heal. Informatics Res., 2024)

Variational temporal deconfounder network for individualized treatment effect estimation with longitudinal observational data. - Hao Dai; Yu Huang 018; Yuxi Liu; Xing He 003; Jingchuan Guo; Mattia Prosperi; Jiang Bian 001 (J. Biomed. Informatics, 2025)

GatorCLR: Personalized predictions of patient outcomes on electronic health records using self-supervised contrastive graph representation. - Yuxi Liu; Zhenhao Zhang; Jiacong Mi; Shirui Pan; Tianlong Chen 001; Yi Guo 005; Xing He 003; Jiang Bian 001 (J. Biomed. Informatics, 2025)

Unlocking efficiency in real-world collaborative studies: a multi-site international study with one-shot lossless GLMM algorithm. - Jiayi Tong; Jenna Marie Reps; Chongliang Luo; Yiwen Lu; Lu Li; Juan Manuel Ramirez-Anguita; Milou T. Brand; Scott L. DuVall; Thomas Falconer; Alex Mayer Fuentes; Xing He 003; Michael E. Matheny; et al. (npj Digit. Medicine, 2025)

COLA-GLM: collaborative one-shot and lossless algorithms of generalized linear models for decentralized observational healthcare data. - Qiong Wu; Jenna Marie Reps; Lu Li; Bingyu Zhang; Yiwen Lu; Jiayi Tong; Dazheng Zhang; Thomas Lumley; Milou T. Brand; Mui Van Zandt; Thomas Falconer; Xing He 003; et al. (npj Digit. Medicine, 2025)