The effects of normalization on the correlation structure of microarray data. - Xing Qiu; Andrew I. Brooks; Lev Klebanov; Andrei Yakovlev (BMC Bioinform., 2005)

Assessing stability of gene selection in microarray data analysis. - Xing Qiu; Yuanhui Xiao; Alexander Gordon; Andrei Yakovlev (BMC Bioinform., 2006)

Some Comments on Instability of False Discovery Rate Estimation. - Xing Qiu; Andrei Yakovlev (J. Bioinform. Comput. Biol., 2006)

Comments on Probabilistic Models Behind the Concept of False Discovery Rate. - Xing Qiu; Andrei Yakovlev (J. Bioinform. Comput. Biol., 2007)

Testing Differential Expression in Nonoverlapping gene Pairs: a New Perspective for the Empirical Bayes Method. - Lev Klebanov; Xing Qiu; Andrei Yakovlev (J. Bioinform. Comput. Biol., 2008)

Detecting intergene correlation changes in microarray analysis: a new approach to gene selection. - Rui Hu 004; Xing Qiu; Galina V. Glazko; Lev Klebanov; Andrei Yakovlev (BMC Bioinform., 2009)

A new gene selection procedure based on the covariance distance. - Rui Hu 004; Xing Qiu; Galina V. Glazko (Bioinform., 2010)

Hierarchical Parallelization of Gene Differential Association Analysis. - Mark Needham; Rui Hu 004; Sandhya Dwarkadas; Xing Qiu (BMC Bioinform., 2011)

Quantification of accuracy and precision of multi-center DTI measurements: A diffusion phantom and human brain study. - Tong Zhu; Rui Hu; Xing Qiu; Michael Taylor; Yuen Tso; Constantin T. Yiannoutsos; Bradford Navia; Susumu Mori; Sven Ekholm; Giovanni Schifitto; Jianhui Zhong (NeuroImage, 2011)

The impact of quantile and rank normalization procedures on the testing power of gene differential expression analysis. - Xing Qiu; Hulin Wu; Rui Hu 004 (BMC Bioinform., 2013)

MWCNTs-like protection layer formation on bacterial cellulose bundles as a potential material for suspended resonator. - Yin Tung Lee; Xing Qiu; Pun To Yung (EMBC, 2014)

A bacterial spore model of pulsed electric fields on spore morphology change revealed by simulation and SEM. - Xing Qiu; Yin Tung Lee; Pun To Yung (EMBC, 2014)

FUNNEL-GSEA: FUNctioNal ELastic-net regression in time-course gene set enrichment analysis. - Yun Zhang 021; David J. Topham; Juilee Thakar; Xing Qiu (Bioinform., 2017)

Super-delta: a new differential gene expression analysis procedure with robust data normalization. - Yuhang Liu; Jinfeng Zhang; Xing Qiu (BMC Bioinform., 2017)

Restructured GEO: restructuring Gene Expression Omnibus metadata for genome dynamics analysis. - Guocai Chen; Juan Camilo Ramírez; Nan Deng; Xing Qiu; Canglin Wu; W. Jim Zheng; Hulin Wu (Database J. Biol. Databases Curation, 2019)

Highly efficient hypothesis testing methods for regression-type tests with correlated observations and heterogeneous variance structure. - Yun Zhang 021; Gautam Bandyopadhyay; David J. Topham; Ann R. Falsey; Xing Qiu (BMC Bioinform., 2019)

Building Extraction from High-Resolution Remote Sensing Images by Adaptive Morphological Attribute Profile under Object Boundary Constraint. - Chao Wang 084; Yi Shen 013; Hui Liu; Kaiguang Zhao; Hongyan Xing; Xing Qiu (Sensors, 2019)

MatchMixeR: a cross-platform normalization method for gene expression data integration. - Serin Zhang; Jiang Shao; Disa Yu; Xing Qiu; Jinfeng Zhang (Bioinform., 2020)

Damaged buildings recognition of post-earthquake high-resolution remote sensing images based on feature space and decision tree optimization. - Chao Wang 084; Xing Qiu; Hui Liu; Dan Li; Kaiguang Zhao; Lili Wang (Comput. Sci. Inf. Syst., 2020)

Super-delta2: an enhanced differential expression analysis procedure for multi-group comparisons of RNA-seq data. - Zihan Cui; Yuhang Liu; Jinfeng Zhang; Xing Qiu (Bioinform., 2021)

A systems genomics approach uncovers molecular associates of RSV severity. - Matthew N. McCall; Chin-Yi Chu; Lu Wang; Lauren Benoodt; Juilee Thakar; Anthony Corbett; Jeanne Holden-Wiltse; Christopher Slaunwhite; Alex Grier; Steven R. Gill; Ann R. Falsey; David J. Topham; et al. (PLoS Comput. Biol., 2021)

Earthquake-Damaged Buildings Detection in Very High-Resolution Remote Sensing Images Based on Object Context and Boundary Enhanced Loss. - Chao Wang 084; Xing Qiu; Hai Huan; Shuai Wang 031; Yan Zhang 105; Xiaohui Chen; Wei He (Remote. Sens., 2021)

Identifiability analysis of linear ordinary differential equation systems with a single trajectory. - Xing Qiu; Tao Xu; Babak Soltanalizadeh; Hulin Wu (Appl. Math. Comput., 2022)

FastMix: a versatile data integration pipeline for cell type-specific biomarker inference. - Yun Zhang 021; Hao Sun; Aishwarya Mandava; Brian D. Aevermann; Tobias R. Kollmann; Richard H. Scheuermann; Xing Qiu; Yu Qian (Bioinform., 2022)

De Novo Design of κ-Opioid Receptor Antagonists Using a Generative Deep-Learning Framework. - Leslie Salas-Estrada; Davide Provasi; Xing Qiu; Husnu Ümit Kaniskan; Xi-Ping Huang; Jeffrey F. Diberto; João Marcelo Lamim Ribeiro; Jian Jin; Bryan L. Roth; Marta Filizola (J. Chem. Inf. Model., 2023)

Video stalling identification for web live streaming under HTTP-FLV. - Dandan Niu; Guang Cheng 001; Zihan Chen 003; Xing Qiu (Comput. Networks, 2024)

Efficient Multidimensional Functional Data Analysis Using Marginal Product Basis Systems. - William Consagra; Arun Venkataraman; Xing Qiu (J. Comput. Graph. Stat., 2024)

Tighter bound estimation for efficient biquadratic optimization over unit spheres. - Shigui Li; Linzhang Lu; Xing Qiu; Zhen Chen; Delu Zeng (J. Glob. Optim., 2024)

Dual-Channel Interactive Graph Transformer for Traffic Classification with Message-Aware Flow Representation. - Xing Qiu; Guang Cheng 001; Weizhou Zhu; Dandan Niu; Nan Fu (AAAI, 2025)

A failure analysis framework to provide pure anomalous data using multi-source data of fault-sensitive microservices. - Nan Fu; Guang Cheng 001; Guangye Dai; Hantao Mei; Xing Qiu; Yue Teng (J. Syst. Softw., 2025)

A comprehensive large-scale biomedical knowledge graph for AI-powered data-driven biomedical research. - Yuan Zhang; Xin Sui; Feng Pan; Kaixian Yu; Keqiao Li; Shubo Tian; Arslan Erdengasileng; Qing Han; Wanjing Wang; Jianan Wang; Jian Wang; Donghu Sun; et al. (Nat. Mac. Intell., 2025)