vsRNAfinder: a novel method for identifying high-confidence viral small RNAs from small RNA-Seq data. - Zena Cai; Ping Fu; Ye Qiu; Aiping Wu; Gaihua Zhang; Yirong Wang; Taijiao Jiang; Xing-Yi Ge; Haizhen Zhu; Yousong Peng (Briefings Bioinform., 2022)

VirusRecom: an information-theory-based method for recombination detection of viral lineages and its application on SARS-CoV-2. - Zhi-Jian Zhou; Chen-Hui Yang; Sheng-Bao Ye; Xiao-Wei Yu; Ye Qiu; Xing-Yi Ge (Briefings Bioinform., 2023)