ODORactor: a web server for deciphering olfactory coding. - Xinyi Liu 003; Xubo Su; Fei Wang 012; Zhimin Huang; Qi Wang; Zhen Li; Ruina Zhang; Lifang Wu; Yi Pan; Yingyi Chen; Hanyi Zhuang; Guoqiang Chen; et al. (Bioinform., 2011)

ASD: a comprehensive database of allosteric proteins and modulators. - Zhimin Huang; Liang Zhu; Yan Cao; Geng Wu; Xinyi Liu 003; Yingyi Chen; Qi Wang; Ting Shi; Yaxue Zhao; Yuefei Wang; Weihua Li 005; Yixue Li; et al. (Nucleic Acids Res., 2011)

Insights into the Role of Magnesium Triad in myo-Inositol Monophosphatase: Metal Mechanism, Substrate Binding, and Lithium Therapy. - Shaoyong Lu; Wenkang Huang; Xiaobai Li; Zhimin Huang; Xinyi Liu 003; Yingyi Chen; Ting Shi; Jian Zhang 037 (J. Chem. Inf. Model., 2012)

Allosite: a method for predicting allosteric sites. - Wenkang Huang; Shaoyong Lu; Zhimin Huang; Xinyi Liu 003; Linkai Mou; Yu Luo; Yanlong Zhao; Yaqin Liu; Zhongjie Chen; Tingjun Hou; Jian Zhang 037 (Bioinform., 2013)

ASD v2.0: updated content and novel features focusing on allosteric regulation. - Zhimin Huang; Linkai Mou; Qiancheng Shen; Shaoyong Lu; Chuangang Li; Xinyi Liu 003; Guanqiao Wang; Shuai Li; Lv Geng; Yaqin Liu; Jiawei Wu; Guoqiang Chen; et al. (Nucleic Acids Res., 2014)

ASBench: benchmarking sets for allosteric discovery. - Wenkang Huang; Guanqiao Wang; Qiancheng Shen; Xinyi Liu 003; Shaoyong Lu; Lv Geng; Zhimin Huang; Jian Zhang 037 (Bioinform., 2015)

ORDB, HORDE, ODORactor and other on-line knowledge resources of olfactory receptor-odorant interactions. - Luis N. Marenco; Rixin Wang; Robert A. McDougal; Tsviya Olender; Michal Twik; Elspeth A. Bruford; Xinyi Liu 003; Jian Zhang 037; Doron Lancet; Gordon M. Shepherd; Chiquito J. Crasto (Database J. Biol. Databases Curation, 2016)

Alloscore: a method for predicting allosteric ligand-protein interactions. - Shuai Li; Qiancheng Shen; Minyi Su; Xinyi Liu 003; Shaoyong Lu; Zhongjie Chen; Renxiao Wang; Jian Zhang 037 (Bioinform., 2016)

ASD v3.0: unraveling allosteric regulation with structural mechanisms and biological networks. - Qiancheng Shen; Guanqiao Wang; Shuai Li; Xinyi Liu 003; Shaoyong Lu; Zhongjie Chen; Kun Song 003; Junhao Yan; Lv Geng; Zhimin Huang; Wenkang Huang; Guoqiang Chen; et al. (Nucleic Acids Res., 2016)

Improved Method for the Identification and Validation of Allosteric Sites. - Kun Song 003; Xinyi Liu 003; Wenkang Huang; Shaoyong Lu; Qiancheng Shen; Lu Zhang; Jian Zhang 037 (J. Chem. Inf. Model., 2017)

AlloFinder: a strategy for allosteric modulator discovery and allosterome analyses. - Min Huang; Kun Song 003; Xinyi Liu 003; Shaoyong Lu; Qiancheng Shen; Renxiao Wang; Jingze Gao; Yuanyuan Hong; Qian Li; Duan Ni; Jianrong Xu; Guoqiang Chen; et al. (Nucleic Acids Res., 2018)

AlloDriver: a method for the identification and analysis of cancer driver targets. - Kun Song 003; Qian Li; Wei Gao; Shaoyong Lu; Qiancheng Shen; Xinyi Liu 003; Yongyan Wu; Binquan Wang; Houwen Lin; Guoqiang Chen; Jian Zhang 037 (Nucleic Acids Res., 2019)

Unraveling allosteric landscapes of allosterome with ASD. - Xinyi Liu 003; Shaoyong Lu; Kun Song 003; Qiancheng Shen; Duan Ni; Qian Li; Xinheng He; Hao Zhang; Qi Wang; Yingyi Chen; Xinyi Li; Jing Wu; et al. (Nucleic Acids Res., 2020)

IDDB: a comprehensive resource featuring genes, variants and characteristics associated with infertility. - Jing Wu; Danjun Li; Xinyi Liu 003; Qian Li; Xinheng He; Jiale Wei; Xinyi Li; Mingyu Li; Ashfaq Ur Rehman; Yujia Xia; Chengwei Wu; Jian Zhang 037; et al. (Nucleic Acids Res., 2021)

DeepAlloDriver: a deep learning-based strategy to predict cancer driver mutations. - Qianqian Song; Mingyu Li; Qian Li; Xun Lu; Kun Song 003; Ziliang Zhang; Jiale Wei; Liang Zhang; Jiacheng Wei; Youqiong Ye; Jinyin Zha; Qiufen Zhang; et al. (Nucleic Acids Res., 2023)

AlloReverse: multiscale understanding among hierarchical allosteric regulations. - Jinyin Zha; Qian Li; Xinyi Liu 003; Weidong Lin; Tingting Wang; Jiacheng Wei; Ziliang Zhang; Xun Lu; Jing Wu; Duan Ni; Kun Song 003; Liang Zhang; et al. (Nucleic Acids Res., 2023)

Deciphering the comprehensive knowledgebase landscape featuring infertility with IDDB Xtra. - Qian Li; Zhijie Hu; Jiayin He; Xinyi Liu 003; Yini Liu; Jiale Wei; Binjian Wu; Xun Lu; Hongxi He; Yuqi Zhang; Jixiao He; Mingyu Li; et al. (Comput. Biol. Medicine, 2024)

ILETIA: An AI-enhanced method for individualized trigger-oocyte pickup interval estimation of progestin-primed ovarian stimulation protocol. - Binjian Wu; Qian Li; Zhe Kuang; Hongyuan Gao; Xinyi Liu 003; Haiyan Guo; Qiuju Chen; Xinyi Liu 003; Yangruizhe Jiang; Yuqi Zhang; Jinyin Zha; Mingyu Li; et al. (CoRR, 2025)

ILETIA: An AI-enhanced method for individualized trigger-oocyte pickup interval estimation of progestin-primed ovarian stimulation protocol. - Binjian Wu; Qian Li; Zhe Kuang; Hongyuan Gao; Xinyi Liu 003; Haiyan Guo; Qiuju Chen; Xinyi Liu 003; Yangruizhe Jiang; Yuqi Zhang; Jinyin Zha; Mingyu Li; et al. (CoRR, 2025)