The Variations, Combination Strategies Analysis of Particle Swarm Optimization. - Xiujuan Lei; Zhongke Shi (ICNC (4), 2007)

Optimization and Simulation of a MO Problem Solved by GAs and PSO. - Xiujuan Lei; Zhongke Shi; Laijun Wang (ICNC (4), 2007)

The aircraft departure scheduling based on particle swarm optimization combined with simulated annealing algorithm. - Fu Ali; Xiujuan Lei; Xiao Xiao (IEEE Congress on Evolutionary Computation, 2008)

The aircraft departure scheduling based on second-order oscillating particle swarm optimization algorithm. - Xiujuan Lei; Fu Ali; Zhongke Shi (IEEE Congress on Evolutionary Computation, 2008)

Two-Dimensional Maximum Entropy Image Segmentation Method Based on Quantum-Behaved Particle Swarm Optimization Algorithm. - Xiujuan Lei; Ali Fu (ICNC (3), 2008)

Air robot path planning based on Intelligent Water Drops optimization. - Haibin Duan; Senqi Liu; Xiujuan Lei (IJCNN, 2008)

Application of Improved Particle Swarm Optimization Algorithm in UCAV Path Planning. - Qianzhi Ma; Xiujuan Lei (AICI, 2009)

Mobile Robot Path Planning with Complex Constraints Based on the Second-Order Oscillating Particle Swarm Optimization Algorithm. - Qianzhi Ma; Xiujuan Lei; Qun Zhang (CSIE (5), 2009)

2-D Maximum-Entropy Thresholding Image Segmentation Method Based on Second-Order Oscillating PSO. - Xiujuan Lei; Ali Fu (ICNC (3), 2009)

Dynamic Path Planning of Mobile Robots Based on ABC Algorithm. - Qianzhi Ma; Xiujuan Lei (AICI (2), 2010)

Multiple Sequence Alignment Based on ABC_SA. - Xiaojun Xu; Xiujuan Lei (AICI (2), 2010)

Improved artificial bee colony algorithm and its application in data clustering. - Xiujuan Lei; Xu Huang; Aidong Zhang (BIC-TA, 2010)

Artificial bee colony algorithm for solving multiple sequence alignment. - Xiujuan Lei; Jingjing Sun; Xiaojun Xu; Ling Guo (BIC-TA, 2010)

Application of artificial fish school algorithm in UCAV path planning. - Qianzhi Ma; Xiujuan Lei (BIC-TA, 2010)

An improved projection pursuit clustering model and its application based on Quantum-behaved PSO. - Qun Zhang; Xiujuan Lei; Xu Huang; Aidong Zhang (ICNC, 2010)

Clustering PPI Data Based on Bacteria Foraging Optimization Algorithm. - Xiujuan Lei; Shuang Wu; Liang Ge; Aidong Zhang (BIBM, 2011)

Clustering PPI network based on functional flow model through artificial bee colony algorithm. - Shuang Wu; Xiujuan Lei; Jianfang Tian (ICNC, 2011)

An Improved bacteria Foraging Optimization Algorithm based on intuitionistic fuzzy Set for Clustering PPI Networks. - Shuang Wu; Xiujuan Lei; Jianfang Tian (QLSC, 2012)

Clustering PPI data based on Improved functional-flow model through Quantum-behaved PSO. - Xiujuan Lei; Xu Huang; Lei Shi 021; Aidong Zhang (Int. J. Data Min. Bioinform., 2012)

PPI modules detection method through ABC-IFC algorithm. - Xiujuan Lei; Jianfang Tian; Fang-Xiang Wu (BIBM, 2013)

The clustering model and algorithm of PPI network based on propagating mechanism of artificial bee colony. - Xiujuan Lei; Jianfang Tian; Liang Ge; Aidong Zhang (Inf. Sci., 2013)

Detecting functional modules in dynamic protein-protein interaction networks using Markov Clustering and Firefly Algorithm. - Xiujuan Lei; Fang-Xiang Wu; Fei Wang 095; Aidong Zhang (BIBM, 2014)

A simplified glowworm swarm optimization algorithm. - Mingyu Du; Xiujuan Lei; Zhenqiang Wu (IEEE Congress on Evolutionary Computation, 2014)

Chaotic Fruit Fly Optimization Algorithm. - Xiujuan Lei; Mingyu Du; Jin Xu; Ying Tan 002 (ICSI (1), 2014)

Clustering Using Improved Cuckoo Search Algorithm. - Jie Zhao 012; Xiujuan Lei; Zhenqiang Wu; Ying Tan 002 (ICSI (1), 2014)

A Novel Evolutionary Algorithm Based on Decomposition and Adaptive Weight Adjustment for Synthesis Gas Production. - Cai Dai; Xiujuan Lei (CIS, 2015)

PPI网络的改进马尔科夫聚类算法 (Improved MCL Clustering Algorithm in PPI Networks). - Qingsheng Hu; Xiujuan Lei (计算机科学, 2015)

Detecting protein complexes from DPINs by OPTICS based on particle swarm optimization. - Xiujuan Lei; Huan Li; Fang-Xiang Wu (BIBM, 2016)

Mining protein complexes based on topology potential from weighted dynamic PPI network. - Xiujuan Lei; Yuchen Zhang 003; Fang-Xiang Wu; Aidong Zhang (BIBM, 2016)

Identifying protein complexes in dynamic protein-protein interaction networks based on Cuckoo Search algorithm. - Jie Zhao 012; Xiujuan Lei; Fang-Xiang Wu (BIBM, 2016)

A decomposition based evolutionary algorithm with uniform design for multi-objective optimization. - Cai Dai; Xiujuan Lei; Yulian Ding (CEC, 2016)

A New Evolutionary Algorithm Based on Decomposition for Multi-Objective Optimization Problems. - Cai Dai; Xiujuan Lei (CIS, 2016)

A Novel Fitness Function Based on Decomposition for Multi-objective Optimization Problems. - Cai Dai; Xiujuan Lei; Xiaofang Guo (ICIC (2), 2016)

Cuckoo Search Algorithm Inspired by Artificial Bee Colony and Its Application. - Yin Gao; Xiujuan Lei; Cai Dai (ICSI (1), 2016)

Detecting Firefly Algorithm for Numerical Optimization. - Yuchen Zhang 003; Xiujuan Lei; Ying Tan 002 (ICSI (1), 2016)

Detecting protein complexes from DPINs by density based clustering with Pigeon-Inspired Optimization Algorithm. - Xiujuan Lei; Yulian Ding; Fang-Xiang Wu (Sci. China Inf. Sci., 2016)

Protein complex identification through Markov clustering with firefly algorithm on dynamic protein-protein interaction networks. - Xiujuan Lei; Fei Wang 095; Fang-Xiang Wu; Aidong Zhang; Witold Pedrycz (Inf. Sci., 2016)

Identification of dynamic protein complexes based on fruit fly optimization algorithm. - Xiujuan Lei; Yulian Ding; Hamido Fujita; Aidong Zhang (Knowl. Based Syst., 2016)

Predicting Essential Proteins Based on Gene Expression Data, Subcellular Localization and PPI Data. - Xiujuan Lei; Siguo Wang; Linqiang Pan (BIC-TA, 2017)

A comprehensive survey of brain storm optimization algorithms. - Shi Cheng; Yifei Sun 004; Junfeng Chen; Quande Qin; Xianghua Chu; Xiujuan Lei; Yuhui Shi 001 (CEC, 2017)

An Improvement Based Evolutionary Algorithm with Adaptive Weight Adjustment for Many-Objective Optimization. - Cai Dai; Xiujuan Lei (CIS, 2017)

Genome-Wide Identification of Essential Proteins by Integrating RNA-seq, Subcellular Location and Complexes Information. - Chunyan Fan; Xiujuan Lei (ICIC (2), 2017)

Genomic Privacy Preserving Framework for High-Order SNPs Linkage Disequilibrium on Correlated Sequences. - Hai Liu 007; Zhenqiang Wu; Changgen Peng; Xiujuan Lei (NaNA, 2017)

Normalized Ranking Based Particle Swarm Optimizer for Many Objective Optimization. - Shi Cheng; Xiujuan Lei; Junfeng Chen; Jiqiang Feng; Yuhui Shi 001 (SEAL, 2017)

Firefly Clustering Method for Mining Protein Complexes. - Yuchen Zhang 003; Xiujuan Lei; Ying Tan 002 (ICSI (1), 2017)

Solving non-convex/non-smooth economic load dispatch problems via an enhanced particle swarm optimization. - Quande Qin; Shi Cheng; Xianghua Chu; Xiujuan Lei; Yuhui Shi 001 (Appl. Soft Comput., 2017)

Predicting Protein Complexes in Weighted Dynamic PPI Networks Based on ICSC. - Jie Zhao 012; Xiujuan Lei; Fang-Xiang Wu (Complex., 2017)

An improvement decomposition-based multi-objective evolutionary algorithm with uniform design. - Cai Dai; Xiujuan Lei (Knowl. Based Syst., 2017)

Two-step Random Walk Algorithm to Identify Cancer Genes Based on Various Biological Data. - Wenxiang Zhang; Xiujuan Lei (BIBM, 2018)

Mining Overlapping Protein Complexes in PPI Network Based on Granular Computation in Quotient Space. - Jie Zhao 012; Xiujuan Lei (ICIC (1), 2018)

ACO Based Core-Attachment Method to Detect Protein Complexes in Dynamic PPI Networks. - Jing Liang; Xiujuan Lei; Ling Guo; Ying Tan 002 (ICSI (1), 2018)

Locating Multiple Optima via Brain Storm Optimization Algorithms. - Shi Cheng; Junfeng Chen; Xiujuan Lei; Yuhui Shi 001 (IEEE Access, 2018)

CircR2Disease: a manually curated database for experimentally supported circular RNAs associated with various diseases. - Chunyan Fan; Xiujuan Lei; Zengqiang Fang; Qinghua Jiang; Fang-Xiang Wu (Database J. Biol. Databases Curation, 2018)

Improved flower pollination algorithm for identifying essential proteins. - Xiujuan Lei; Ming Fang; Fang-Xiang Wu; Luonan Chen (BMC Syst. Biol., 2018)

A Decomposition-Based Multiobjective Evolutionary Algorithm with Adaptive Weight Adjustment. - Cai Dai; Xiujuan Lei (Complex., 2018)

Identifying Essential Proteins in Dynamic PPI Network with Improved FOA. - Xiujuan Lei; Siguo Wang; Linqiang Pan (Int. J. Comput. Commun. Control, 2018)

Topology potential based seed-growth method to identify protein complexes on dynamic PPI data. - Xiujuan Lei; Yuchen Zhang 003; Shi Cheng; Fang-Xiang Wu; Witold Pedrycz (Inf. Sci., 2018)

An Adaptive Decomposition-based Multi-objective Evolutionary Algorithm for Fuzzy Portfolio Selection. - Cai Dai; Xiaoqi Shi; Xiujuan Lei; Wei Yue 005 (J. Inf. Hiding Multim. Signal Process., 2018)

Predicting essential proteins based on RNA-Seq, subcellular localization and GO annotation datasets. - Xiujuan Lei; Jie Zhao 012; Hamido Fujita; Aidong Zhang (Knowl. Based Syst., 2018)

Brain Storm Optimization Algorithms: More Questions than Answers. - Shi Cheng; Hui Lu 002; Xiujuan Lei; Yuhui Shi 001 (Brain Storm Optimization Algorithms, 2019)

Human Protein Complex Signatures for Drug Repositioning. - Fei Wang 095; Xiujuan Lei; Bo Liao; Fang-Xiang Wu (BCB, 2019)

PDG-PIO: Predicting Disease-genes Based on Pigeon-inspired Optimization. - Yuchen Zhang 003; Xiujuan Lei; Shi Cheng (CEC, 2019)

Dynamic Multimodal Optimization: A Preliminary Study. - Shi Cheng; Hui Lu 002; Yi-Nan Guo 001; Xiujuan Lei; Jing Liang 005; Junfeng Chen; Yuhui Shi 001 (CEC, 2019)

Essential Protein Detection from Protein-Protein Interaction Networks Using Immune Algorithm. - Xiaoqin Yang; Xiujuan Lei; Jiayin Wang (IWBBIO (1), 2019)

Adaptive Differential Privacy of Character and Its Application for Genome Data Sharing. - Hai Liu 007; Zhenqiang Wu; Changgen Peng; Xiujuan Lei; Feng Tian 004; Laifeng Lu (NaNA, 2019)

A New Method for Identification of Essential Proteins by Information Entropy of Protein Complex and Subcellular Localization. - Jie Zhao 012; Xiujuan Lei; Xiaoqin Yang; Ling Guo (ICSI (2), 2019)

Predicting Essential Proteins Based on Second-Order Neighborhood Information and Information Entropy. - Jie Zhao 012; Xiujuan Lei (IEEE Access, 2019)

Prediction of miRNA-circRNA associations based on k-NN multi-label with random walk restart on a heterogeneous network. - Zengqiang Fang; Xiujuan Lei (Big Data Min. Anal., 2019)

Predicting metabolite-disease associations based on KATZ model. - Xiujuan Lei; Cheng Zhang (BioData Min., 2019)

Protein complex detection based on flower pollination mechanism in multi-relation reconstructed dynamic protein networks. - Xiujuan Lei; Ming Fang; Ling Guo; Fang-Xiang Wu (BMC Bioinform., 2019)

Identifying Cancer genes by combining two-rounds RWR based on multiple biological data. - Wenxiang Zhang; Xiujuan Lei; Chen Bian (BMC Bioinform., 2019)

Detecting overlapping protein complexes in weighted PPI network based on overlay network chain in quotient space. - Jie Zhao 012; Xiujuan Lei (BMC Bioinform., 2019)

Generalized pigeon-inspired optimization algorithms. - Shi Cheng; Xiujuan Lei; Hui Lu 002; Yong Zhang 016; Yuhui Shi 001 (Sci. China Inf. Sci., 2019)

A Multiobjective Brain Storm Optimization Algorithm Based on Decomposition. - Cai Dai; Xiujuan Lei (Complex., 2019)

BRWSP: Predicting circRNA-Disease Associations Based on Biased Random Walk to Search Paths on a Multiple Heterogeneous Network. - Xiujuan Lei; Wenxiang Zhang (Complex., 2019)

Identify protein complexes based on PageRank algorithm and architecture on dynamic PPI networks. - Xiujuan Lei; Jing Liang; Ling Guo (Int. J. Data Min. Bioinform., 2019)

Predicting the associations between microbes and diseases by integrating multiple data sources and path-based HeteSim scores. - Chunyan Fan; Xiujuan Lei; Ling Guo; Aidong Zhang (Neurocomputing, 2019)

Predicting disease-genes based on network information loss and protein complexes in heterogeneous network. - Xiujuan Lei; Yuchen Zhang 003 (Inf. Sci., 2019)

Moth-flame optimization-based algorithm with synthetic dynamic PPI networks for discovering protein complexes. - Xiujuan Lei; Ming Fang; Hamido Fujita (Knowl. Based Syst., 2019)

Random walk based method to identify essential proteins by integrating network topology and biological characteristics. - Xiujuan Lei; Xiaoqin Yang; Hamido Fujita (Knowl. Based Syst., 2019)

Graph Convolution Networks Using Message Passing and Multi-Source Similarity Features for Predicting circRNA-Disease Association. - Thosini Bamunu Mudiyanselage; Xiujuan Lei; Nipuna Senanayake; Yanqing Zhang 001; Yi Pan 001 (BIBM, 2020)

Inferring Candidate CircRNA-Disease Associations by Bi-random Walk Based on CircRNA Regulatory Similarity. - Chunyan Fan; Xiujuan Lei; Ying Tan 002 (ICSI, 2020)

Identification of Pathway-Specific Protein Domain by Incorporating Hyperparameter Optimization Based on 2D Convolutional Neural Network. - Ali Ghulam; Xiujuan Lei; Yuchen Zhang 003; Shi Cheng; Min Guo (IEEE Access, 2020)

Disease-Pathway Association Prediction Based on Random Walks With Restart and PageRank. - Ali Ghulam; Xiujuan Lei; Min Guo; Chen Bian (IEEE Access, 2020)

ISGm1A: Integration of Sequence Features and Genomic Features to Improve the Prediction of Human m1A RNA Methylation Sites. - Lian Liu; Xiujuan Lei; Jia Meng 001; Zhen Wei (IEEE Access, 2020)

CircRNA-disease associations prediction based on metapath2vec++ and matrix factorization. - Yuchen Zhang 003; Xiujuan Lei; Zengqiang Fang; Yi Pan 001 (Big Data Min. Anal., 2020)

Predicting novel CircRNA-disease associations based on random walk and logistic regression model. - Yulian Ding; Bolin Chen; Xiujuan Lei; Bo Liao; Fang-Xiang Wu (Comput. Biol. Chem., 2020)

Predicting Metabolite-Disease Associations Based on Linear Neighborhood Similarity with Improved Bipartite Network Projection Algorithm. - Xiujuan Lei; Cheng Zhang (Complex., 2020)

Relational completion based non-negative matrix factorization for predicting metabolite-disease associations. - Xiujuan Lei; Jiaojiao Tie; Hamido Fujita (Knowl. Based Syst., 2020)

A decomposition-based evolutionary algorithm with adaptive weight adjustment for many-objective problems. - Cai Dai; Xiujuan Lei; Xiaoguang He (Soft Comput., 2020)

Artificial Fish Swarm Optimization Based Method to Identify Essential Proteins. - Xiujuan Lei; Xiaoqin Yang; Fang-Xiang Wu (IEEE ACM Trans. Comput. Biol. Bioinform., 2020)

Introducing Heuristic Information Into Ant Colony Optimization Algorithm for Identifying Epistasis. - Yingxia Sun; Xuan Wang; Junliang Shang; Jin-Xing Liu 001; Chun-Hou Zheng 001; Xiujuan Lei (IEEE ACM Trans. Comput. Biol. Bioinform., 2020)

Matrix factorization with neural network for predicting circRNA-RBP interactions. - Zhengfeng Wang; Xiujuan Lei (BMC Bioinform., 2020)

Predicting Microbe-Disease Association via Tripartite Network and Relation Graph Convolutional Network. - Yueyue Wang; Xiujuan Lei; Yi Pan 001 (ISBRA, 2021)

Evolutionary computation for solving search-based data analytics problems. - Shi Cheng; Lianbo Ma; Hui Lu 002; Xiujuan Lei; Yuhui Shi 001 (Artif. Intell. Rev., 2021)

A comprehensive survey on computational methods of non-coding RNA and disease association prediction. - Xiujuan Lei; Thosini Bamunu Mudiyanselage; Yuchen Zhang 003; Chen Bian; Wei Lan; Ning Yu 004; Yi Pan 001 (Briefings Bioinform., 2021)

Prediction of RBP binding sites on circRNAs using an LSTM-based deep sequence learning architecture. - Zhengfeng Wang; Xiujuan Lei (Briefings Bioinform., 2021)

Identifying the sequence specificities of circRNA-binding proteins based on a capsule network architecture. - Zhengfeng Wang; Xiujuan Lei (BMC Bioinform., 2021)

Logistic regression algorithm to identify candidate disease genes based on reliable protein-protein interaction network. - Xiujuan Lei; Wenxiang Zhang (Sci. China Inf. Sci., 2021)

An unsupervised method for histological image segmentation based on tissue cluster level graph cut. - Hong-Ming Xu 001; Lina Liu; Xiujuan Lei; Mrinal Mandal 001; Cheng Lu 001 (Comput. Medical Imaging Graph., 2021)

Predicting circRNA-disease associations based on autoencoder and graph embedding. - Jing Yang 063; Xiujuan Lei (Inf. Sci., 2021)

Predicting CircRNA-Disease Associations Based on Improved Weighted Biased Meta-Structure. - Xiujuan Lei; Chen Bian; Yi Pan 001 (J. Comput. Sci. Technol., 2021)

Prediction of disease-associated circRNAs via circRNA-disease pair graph and weighted nuclear norm minimization. - Yuchen Zhang 003; Xiujuan Lei; Yi Pan 001; Witold Pedrycz (Knowl. Based Syst., 2021)

Human Protein Complex-Based Drug Signatures for Personalized Cancer Medicine. - Fei Wang 095; Yulian Ding; Xiujuan Lei; Bo Liao; Fang-Xiang Wu (IEEE J. Biomed. Health Informatics, 2021)

COVID-19 Detection Method Based on Attentional Mechanism and LSTM. - Wanpeng Zhu; Xiujuan Lei (ICSI (2), 2022)

A Deep Neural Network for Cervical Cell Classification Based on Cytology Images. - Ming Fang; Xiujuan Lei; Bo Liao; Fang-Xiang Wu (IEEE Access, 2022)

MLRDFM: a multi-view Laplacian regularized DeepFM model for predicting miRNA-disease associations. - Yulian Ding; Xiujuan Lei; Bo Liao; Fang-Xiang Wu (Briefings Bioinform., 2022)

Predicting drug-drug interactions by graph convolutional network with multi-kernel. - Fei Wang 095; Xiujuan Lei; Bo Liao; Fang-Xiang Wu (Briefings Bioinform., 2022)

Human drug-pathway association prediction based on network consistency projection. - Ali Ghulam; Xiujuan Lei; Yuchen Zhang 003; Zhenqiang Wu (Comput. Biol. Chem., 2022)

CircR2Disease v2.0: An Updated Web Server for Experimentally Validated circRNA-disease Associations and Its Application. - Chunyan Fan; Xiujuan Lei; Jiaojiao Tie; Yuchen Zhang 003; Fang-Xiang Wu; Yi Pan 001 (Genom. Proteom. Bioinform., 2022)

Inferring Metabolite-Disease Association Using Graph Convolutional Networks. - Xiujuan Lei; Jiaojiao Tie; Yi Pan 001 (IEEE ACM Trans. Comput. Biol. Bioinform., 2022)

Identifying Gene Signatures for Cancer Drug Repositioning Based on Sample Clustering. - Fei Wang 095; Yulian Ding; Xiujuan Lei; Bo Liao; Fang-Xiang Wu (IEEE ACM Trans. Comput. Biol. Bioinform., 2022)

Predicting Microbe-Disease Association Based on Multiple Similarities and LINE Algorithm. - Yueyue Wang; Xiujuan Lei; Cheng Lu 001; Yi Pan 001 (IEEE ACM Trans. Comput. Biol. Bioinform., 2022)

Predicting miRNA-Disease Associations Based On Multi-View Variational Graph Auto-Encoder With Matrix Factorization. - Yulian Ding; Xiujuan Lei; Bo Liao; Fang-Xiang Wu (IEEE J. Biomed. Health Informatics, 2022)

Biomarker Identification via a Factorization Machine-Based Neural Network With Binary Pairwise Encoding. - Yulian Ding; Xiujuan Lei; Bo Liao; Fang-Xiang Wu (IEEE ACM Trans. Comput. Biol. Bioinform., 2023)

Microbe-Disease Association Prediction Using RGCN Through Microbe-Drug-Disease Network. - Yueyue Wang; Xiujuan Lei; Yi Pan 001 (IEEE ACM Trans. Comput. Biol. Bioinform., 2023)

A dual graph neural network for drug-drug interactions prediction based on molecular structure and interactions. - Mei Ma; Xiujuan Lei (PLoS Comput. Biol., 2023)

The prediction of molecular toxicity based on BiGRU and GraphSAGE. - Jianping Liu; Xiujuan Lei; Yuchen Zhang 003; Yi Pan 001 (Comput. Biol. Medicine, 2023)

circ2CBA: prediction of circRNA-RBP binding sites combining deep learning and attention mechanism. - Yajing Guo; Xiujuan Lei; Lian Liu; Yi Pan 001 (Frontiers Comput. Sci., 2023)

Identify potential circRNA-disease associations through a multi-objective evolutionary algorithm. - Yuchen Zhang 003; Xiujuan Lei; Cai Dai; Yi Pan 001; Fang-Xiang Wu (Inf. Sci., 2023)

A point crowding-degree based evolutionary algorithm for many-objective optimization. - Cai Dai; Cheng Peng; Xiujuan Lei (Memetic Comput., 2023)

RMDGCN: Prediction of RNA methylation and disease associations based on graph convolutional network with attention mechanism. - Lian Liu; Yumeng Zhou; Xiujuan Lei (PLoS Comput. Biol., 2023)

ICDFGF: Identification of potential circRNA-disease associations based on feature graph factorization. - Yuchen Zhang 003; Xiujuan Lei; Zhengfeng Wang; Yi Pan 001 (BCB, 2024)

HCCL: Hierarchical Channels and Contrastive Learning for Drug-Gene Multi-Relation Prediction. - Yizhe Shang; Jianrui Chen; Xiujuan Lei; Fang-Xiang Wu (BIBM, 2024)

Prediction of miRNA-Disease Associations Based on Hybrid Gated GNN and Multi-Data Integration. - Yeqiang Wang; Sharen Yun; Yuchen Zhang 003; Xiujuan Lei (BIBM, 2024)

Drug Combination Side Effect Prediction Based on Polypharmacy Network and GraphSAGE Algorithm. - Haiqiang Xiao; Xiujuan Lei; Yuchen Zhang 003; Fang-Xiang Wu (BIBM, 2024)

Multi-filter Based Signed Graph Convolutional Networks for Predicting Interactions on Drug Networks. - Ming Chen; Zitao Hu; Xiujuan Lei; Chunyan Ji; Zhao Tong 001; Yi Pan 001 (ISBRA (2), 2024)

Automated Planning and Scheduling with Swarm Intelligence. - Shi Cheng; Hui Lu 002; Xiujuan Lei (ICSI, 2024)

HoRDA: Learning higher-order structure information for predicting RNA-disease associations. - Julong Li; Jianrui Chen; Zhihui Wang 002; Xiujuan Lei (Artif. Intell. Medicine, 2024)

SeaConvNeXt: A Lightweight Two-Branch Network Architecture for Efficient Prediction of Specific IHC Proteins and Antigens on Hematoxylin and Eosin (H&E) Images. - Yuli Chen; Guoping Chen; Guoying Shi; Yao Zhou; Jiayang Bai; Germán Corredor; Cheng Lu 001; Xiujuan Lei (Big Data Min. Anal., 2024)

Molecular Generation and Optimization of Molecular Properties Using a Transformer Model. - Zhongyin Xu; Xiujuan Lei; Mei Ma; Yi Pan 001 (Big Data Min. Anal., 2024)

Deep integrated fusion of local and global features for cervical cell classification. - Ming Fang; Minghan Fu; Bo Liao; Xiujuan Lei; Fang-Xiang Wu (Comput. Biol. Medicine, 2024)

A systematic review on deep learning based methods for cervical cell image analysis. - Ming Fang; Bo Liao; Xiujuan Lei; Fang-Xiang Wu (Neurocomputing, 2024)

Solving multimodal optimization problems by a knowledge-driven brain storm optimization algorithm. - Shi Cheng; Xueping Wang; Mingming Zhang; Xiujuan Lei; Hui Lu 002; Yuhui Shi 001 (Appl. Soft Comput., 2024)

A deep learning framework for predicting molecular property based on multi-type features fusion. - Mei Ma; Xiujuan Lei (Comput. Biol. Medicine, 2024)

An Adaptive Multi-view Feature Fusion Framework Based on Multiple Graphs for Predicting Drug-Drug Interactions. - Fei Wang 095; Zefan Cheng; Xiujuan Lei; Fang-Xiang Wu; Chun-Hou Zheng 001; Yansen Su (ICIC (26), 2025)

Multi-task Learning with Cross-Stitch for Synergistic Effect of Drug Combination Prediction. - Anqi Liang; Xiujuan Lei; Ming Chen; Yi Pan 001 (ISBRA (1), 2025)

Hyperbolic multivariate feature learning in higher-order heterogeneous networks for drug-disease prediction. - Jiamin Li; Jianrui Chen; Junjie Huang; Xiujuan Lei (Artif. Intell. Medicine, 2025)

Molecular Optimization Based on a Monte Carlo Tree Search and Multiobjective Genetic Algorithm. - Chong Zhang; Cai Dai; Xiujuan Lei (J. Chem. Inf. Model., 2025)

MSFusion: A multi-source hybrid feature fusion network for accurate grading of invasive breast cancer using H&E-stained histopathological images. - Yuli Chen; Jiayang Bai; Jinjie Wang; Guoping Chen; Xinxin Zhang; Duanbo Shi; Xiujuan Lei; Peng Gao; Cheng Lu 001 (Medical Image Anal., 2025)

Nucleotide-level circRNA-RBP binding sites prediction based on hybrid encoding scheme and enhanced feature extraction. - Yajing Guo; Xiujuan Lei; Zhengfeng Wang; Ling Guo; Fang-Xiang Wu; Yi Pan 001 (Neural Networks, 2025)

DualC: Drug-Drug Interaction Prediction Based on Dual Latent Feature Extractions. - Lin Guo; Xiujuan Lei; Lian Liu; Ming Chen; Yi Pan 001 (IEEE Trans. Emerg. Top. Comput. Intell., 2025)

Multi-Source Data with Laplacian Eigenmaps and Denoising Autoencoder for Predicting Microbe-Disease Associations via Convolutional Neural Network. - Xiujuan Lei; Ya-Li Chen; Yi Pan 001 (J. Comput. Sci. Technol., 2025)

Predicting miRNA-drug interactions via dual-channel network based on TCN and BiLSTM. - Xiaoxuan Zhang; Xiujuan Lei (Frontiers Comput. Sci., 2025)

Predicting Drug-miRNA Associations Combining SDNE with BiGRU. - Chenyue Lei; Xiujuan Lei (IEEE J. Biomed. Health Informatics, 2025)

DAFNet: A novel Dynamic Adaptive Fusion Network for medical image classification. - Ziheng Cai; Yuli Chen; Jinjie Wang; Xin He; Zixuan Pei; Xiujuan Lei; Cheng Lu 001 (Inf. Fusion, 2026)